PlantSME Plant secondary metabolism enzyme database

Brassica oleracea (brassica_oleracea)

Imported from atlas release summary for Brassica oleracea.

2262
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 710 22 BAHD (286) View species results
Alkaloid pathway 489 23 7DLGT (81) View species results
Phenylpropanoid pathway 475 12 POD (207) View species results
Flavonoid pathway 262 13 UFGT (166) View species results
Rosmarinic acid pathway 181 7 C4H (74) View species results
Steroid pathway 145 14 SMT1/SMT2/SMT3 (52) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2296 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 422 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
Bo1g022250.1 Flavonoid C4H low borderline
Bo1g056950.1 Flavonoid C4H low borderline
Bo1g057010.1 Flavonoid C4H low borderline
Bo23509s010.1 Flavonoid C4H low borderline
Bo3g049950.1 Flavonoid C4H low borderline
Bo4g173070.1 Flavonoid C4H medium borderline
Bo4g173080.1 Flavonoid C4H medium borderline
Bo5g052100.1 Flavonoid C4H medium borderline
Bo7g095640.1 Flavonoid C4H medium borderline
Bo7g103690.1 Flavonoid C4H low borderline
Bo01007s020.1 Rosmarinic Acid C4H low borderline
Bo01007s030.1 Rosmarinic Acid C4H low borderline
Bo01172s030.1 Rosmarinic Acid C4H medium pass
Bo01224s050.1 Rosmarinic Acid C4H low borderline
Bo01244s010.1 Rosmarinic Acid C4H low borderline
Bo01374s020.1 Rosmarinic Acid C4H low borderline
Bo01514s010.1 Rosmarinic Acid C4H low borderline
Bo02165s020.1 Rosmarinic Acid C4H low borderline
Bo02408s010.1 Rosmarinic Acid C4H medium pass
Bo02541s010.1 Rosmarinic Acid C4H low borderline
Bo03142s010.1 Rosmarinic Acid C4H low borderline
Bo05126s010.1 Rosmarinic Acid C4H low borderline
Bo08912s010.1 Rosmarinic Acid C4H low borderline
Bo09649s010.1 Rosmarinic Acid C4H medium pass
Bo14869s010.1 Rosmarinic Acid C4H low borderline
Bo1g002560.1 Rosmarinic Acid C4H low borderline
Bo1g002970.1 Rosmarinic Acid C4H low borderline
Bo1g003680.1 Rosmarinic Acid C4H low borderline
Bo1g003710.1 Rosmarinic Acid C4H low borderline
Bo1g004730.1 Rosmarinic Acid C4H low borderline
Bo1g004740.1 Rosmarinic Acid C4H medium pass
Bo1g004770.1 Rosmarinic Acid C4H low borderline
Bo1g004780.1 Rosmarinic Acid C4H low borderline
Bo1g004790.1 Rosmarinic Acid C4H low borderline
Bo1g004840.1 Rosmarinic Acid C4H medium pass
Bo1g005700.1 Rosmarinic Acid C4H low borderline
Bo1g005770.1 Rosmarinic Acid C4H low borderline
Bo1g011220.1 Rosmarinic Acid C4H medium pass
Bo1g011270.1 Rosmarinic Acid C4H medium pass
Bo1g020370.1 Rosmarinic Acid C4H low borderline
Bo1g022250.1 Rosmarinic Acid C4H low borderline
Bo1g022260.1 Rosmarinic Acid C4H medium pass
Bo1g028540.1 Rosmarinic Acid C4H medium pass
Bo1g039390.1 Rosmarinic Acid C4H low borderline
Bo1g055440.1 Rosmarinic Acid C4H low borderline
Bo1g055450.1 Rosmarinic Acid C4H medium pass
Bo1g056950.1 Rosmarinic Acid C4H low borderline
Bo1g057010.1 Rosmarinic Acid C4H low borderline
Bo1g057520.1 Rosmarinic Acid C4H low borderline
Bo1g075730.1 Rosmarinic Acid C4H low borderline