PlantSME Plant secondary metabolism enzyme database

Brassica oleracea (brassica_oleracea)

Imported from atlas release summary for Brassica oleracea.

2262
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 710 22 BAHD (286) View species results
Alkaloid pathway 489 23 7DLGT (81) View species results
Phenylpropanoid pathway 475 12 POD (207) View species results
Flavonoid pathway 262 13 UFGT (166) View species results
Rosmarinic acid pathway 181 7 C4H (74) View species results
Steroid pathway 145 14 SMT1/SMT2/SMT3 (52) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2296 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 422 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
Bo01007s020.1 Alkaloid IO medium borderline
Bo01007s030.1 Alkaloid IO medium borderline
Bo01244s010.1 Alkaloid IO medium borderline
Bo02165s020.1 Alkaloid IO medium borderline
Bo14869s010.1 Alkaloid IO medium borderline
Bo1g002970.1 Alkaloid IO medium pass
Bo1g004730.1 Alkaloid IO medium borderline
Bo1g004780.1 Alkaloid IO medium borderline
Bo1g023890.1 Alkaloid IO low borderline
Bo1g028540.1 Alkaloid IO medium borderline
Bo2g006900.1 Alkaloid IO medium pass
Bo2g007450.1 Alkaloid IO medium borderline
Bo2g110760.1 Alkaloid IO medium borderline
Bo2g116210.1 Alkaloid IO low borderline
Bo3g042090.1 Alkaloid IO medium borderline
Bo3g049910.1 Alkaloid IO medium borderline
Bo3g088270.1 Alkaloid IO high pass
Bo3g151150.1 Alkaloid IO low borderline
Bo3g152800.1 Alkaloid IO medium pass
Bo3g153450.1 Alkaloid IO medium borderline
Bo3g165550.1 Alkaloid IO medium borderline
Bo3g176040.1 Alkaloid IO medium borderline
Bo4g007070.1 Alkaloid IO medium borderline
Bo4g024710.1 Alkaloid IO low borderline
Bo4g122920.1 Alkaloid IO medium borderline
Bo4g149550.1 Alkaloid IO medium pass
Bo4g197250.1 Alkaloid IO medium borderline
Bo5g002640.1 Alkaloid IO medium borderline
Bo5g021810.1 Alkaloid IO medium borderline
Bo5g110090.1 Alkaloid IO medium borderline
Bo5g137290.1 Alkaloid IO medium borderline
Bo6g056440.1 Alkaloid IO medium borderline
Bo7g045700.1 Alkaloid IO medium borderline
Bo7g063800.1 Alkaloid IO medium borderline
Bo7g108080.1 Alkaloid IO medium borderline
Bo7g113910.1 Alkaloid IO medium borderline
Bo7g113940.1 Alkaloid IO medium borderline
Bo7g118840.1 Alkaloid IO medium pass
Bo8g097370.1 Alkaloid IO medium borderline
Bo8g099980.1 Alkaloid IO medium borderline
Bo8g100560.1 Alkaloid IO medium borderline
Bo8g117730.1 Alkaloid IO medium borderline
Bo9g008590.1 Alkaloid IO medium borderline
Bo9g177260.1 Alkaloid IO medium pass