PlantSME Plant secondary metabolism enzyme database

Brassica oleracea (brassica_oleracea)

Imported from atlas release summary for Brassica oleracea.

2262
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 710 22 BAHD (286) View species results
Alkaloid pathway 489 23 7DLGT (81) View species results
Phenylpropanoid pathway 475 12 POD (207) View species results
Flavonoid pathway 262 13 UFGT (166) View species results
Rosmarinic acid pathway 181 7 C4H (74) View species results
Steroid pathway 145 14 SMT1/SMT2/SMT3 (52) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2296 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 422 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
Reset
Gene Pathway Family Confidence Status
Bo1g075770.1 Rosmarinic Acid C4H low borderline
Bo1g076980.1 Rosmarinic Acid C4H low borderline
Bo1g077120.1 Rosmarinic Acid C4H low borderline
Bo1g087290.1 Rosmarinic Acid C4H low borderline
Bo1g101530.1 Rosmarinic Acid C4H low borderline
Bo1g101970.1 Rosmarinic Acid C4H low borderline
Bo1g110120.1 Rosmarinic Acid C4H low borderline
Bo1g110130.1 Rosmarinic Acid C4H low borderline
Bo1g130050.1 Rosmarinic Acid C4H low borderline
Bo1g134950.1 Rosmarinic Acid C4H low borderline
Bo23509s010.1 Rosmarinic Acid C4H low borderline
Bo2g006900.1 Rosmarinic Acid C4H low borderline
Bo2g006910.1 Rosmarinic Acid C4H low borderline
Bo2g007020.1 Rosmarinic Acid C4H low borderline
Bo2g007440.1 Rosmarinic Acid C4H low borderline
Bo2g007450.1 Rosmarinic Acid C4H low borderline
Bo2g024710.1 Rosmarinic Acid C4H low borderline
Bo2g032590.1 Rosmarinic Acid C4H medium pass
Bo2g055420.1 Rosmarinic Acid C4H low borderline
Bo2g062510.1 Rosmarinic Acid C4H low borderline
Bo2g080930.1 Rosmarinic Acid C4H low borderline
Bo2g097520.1 Rosmarinic Acid C4H low borderline
Bo2g105190.1 Rosmarinic Acid C4H medium pass
Bo2g110760.1 Rosmarinic Acid C4H medium pass
Bo2g110770.1 Rosmarinic Acid C4H low borderline
Bo2g127090.1 Rosmarinic Acid C4H low borderline
Bo2g138660.1 Rosmarinic Acid C4H low borderline
Bo2g138940.1 Rosmarinic Acid C4H medium pass
Bo2g138980.1 Rosmarinic Acid C4H low borderline
Bo2g139000.1 Rosmarinic Acid C4H low borderline
Bo2g139010.1 Rosmarinic Acid C4H low borderline
Bo2g139020.1 Rosmarinic Acid C4H low borderline
Bo2g139040.1 Rosmarinic Acid C4H low borderline
Bo2g139060.1 Rosmarinic Acid C4H low borderline
Bo2g139090.1 Rosmarinic Acid C4H low borderline
Bo2g139100.1 Rosmarinic Acid C4H low borderline
Bo2g140460.1 Rosmarinic Acid C4H low borderline
Bo2g146400.1 Rosmarinic Acid C4H medium pass
Bo2g146410.1 Rosmarinic Acid C4H medium pass
Bo2g150250.1 Rosmarinic Acid C4H medium pass
Bo2g158970.1 Rosmarinic Acid C4H medium pass
Bo2g158980.1 Rosmarinic Acid C4H low borderline
Bo2g159030.1 Rosmarinic Acid C4H medium pass
Bo2g159140.1 Rosmarinic Acid C4H low borderline
Bo2g159250.1 Rosmarinic Acid C4H low borderline
Bo3g002910.1 Rosmarinic Acid C4H low borderline
Bo3g003040.1 Rosmarinic Acid C4H low borderline
Bo3g003600.1 Rosmarinic Acid C4H low borderline
Bo3g019410.1 Rosmarinic Acid C4H low borderline
Bo3g019420.1 Rosmarinic Acid C4H medium pass