PlantSME Plant secondary metabolism enzyme database

Brassica oleracea (brassica_oleracea)

Imported from atlas release summary for Brassica oleracea.

2262
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 710 22 BAHD (286) View species results
Alkaloid pathway 489 23 7DLGT (81) View species results
Phenylpropanoid pathway 475 12 POD (207) View species results
Flavonoid pathway 262 13 UFGT (166) View species results
Rosmarinic acid pathway 181 7 C4H (74) View species results
Steroid pathway 145 14 SMT1/SMT2/SMT3 (52) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2296 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 422 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
Bo4g039400.1 Rosmarinic Acid C4H medium pass
Bo4g039770.1 Rosmarinic Acid C4H low borderline
Bo4g045970.1 Rosmarinic Acid C4H low borderline
Bo4g065810.1 Rosmarinic Acid C4H low borderline
Bo4g074290.1 Rosmarinic Acid C4H low borderline
Bo4g076800.1 Rosmarinic Acid C4H low borderline
Bo4g100090.1 Rosmarinic Acid C4H low borderline
Bo4g102560.1 Rosmarinic Acid C4H low borderline
Bo4g102580.1 Rosmarinic Acid C4H medium pass
Bo4g122910.1 Rosmarinic Acid C4H low borderline
Bo4g122920.1 Rosmarinic Acid C4H medium pass
Bo4g130780.1 Rosmarinic Acid C4H medium pass
Bo4g137210.1 Rosmarinic Acid C4H low borderline
Bo4g137530.1 Rosmarinic Acid C4H low borderline
Bo4g142380.1 Rosmarinic Acid C4H low borderline
Bo4g147100.1 Rosmarinic Acid C4H low borderline
Bo4g149550.1 Rosmarinic Acid C4H low borderline
Bo4g150920.1 Rosmarinic Acid C4H low borderline
Bo4g151330.1 Rosmarinic Acid C4H low borderline
Bo4g154320.1 Rosmarinic Acid C4H low borderline
Bo4g154660.1 Rosmarinic Acid C4H medium pass
Bo4g168080.1 Rosmarinic Acid C4H low borderline
Bo4g173070.1 Rosmarinic Acid C4H medium pass
Bo4g173080.1 Rosmarinic Acid C4H medium pass
Bo4g190570.1 Rosmarinic Acid C4H medium pass
Bo4g191120.1 Rosmarinic Acid C4H medium pass
Bo4g191130.1 Rosmarinic Acid C4H low borderline
Bo4g191380.1 Rosmarinic Acid C4H low borderline
Bo4g195610.1 Rosmarinic Acid C4H low borderline
Bo4g195630.1 Rosmarinic Acid C4H low borderline
Bo4g195640.1 Rosmarinic Acid C4H low borderline
Bo4g195650.1 Rosmarinic Acid C4H low borderline
Bo4g195660.1 Rosmarinic Acid C4H low borderline
Bo4g195670.1 Rosmarinic Acid C4H low borderline
Bo4g195680.1 Rosmarinic Acid C4H medium pass
Bo4g197250.1 Rosmarinic Acid C4H low borderline
Bo5g002580.1 Rosmarinic Acid C4H low borderline
Bo5g002640.1 Rosmarinic Acid C4H low borderline
Bo5g005280.1 Rosmarinic Acid C4H low borderline
Bo5g015310.1 Rosmarinic Acid C4H low borderline
Bo5g015350.1 Rosmarinic Acid C4H low borderline
Bo5g016350.1 Rosmarinic Acid C4H low borderline
Bo5g017750.1 Rosmarinic Acid C4H low borderline
Bo5g019430.1 Rosmarinic Acid C4H low borderline
Bo5g019450.1 Rosmarinic Acid C4H low borderline
Bo5g021810.1 Rosmarinic Acid C4H low borderline
Bo5g023420.1 Rosmarinic Acid C4H low borderline
Bo5g043790.1 Rosmarinic Acid C4H low borderline
Bo5g052100.1 Rosmarinic Acid C4H medium pass
Bo5g079960.1 Rosmarinic Acid C4H low borderline