PlantSME Plant secondary metabolism enzyme database

Brassica oleracea (brassica_oleracea)

Imported from atlas release summary for Brassica oleracea.

2262
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 710 22 BAHD (286) View species results
Alkaloid pathway 489 23 7DLGT (81) View species results
Phenylpropanoid pathway 475 12 POD (207) View species results
Flavonoid pathway 262 13 UFGT (166) View species results
Rosmarinic acid pathway 181 7 C4H (74) View species results
Steroid pathway 145 14 SMT1/SMT2/SMT3 (52) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2296 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 422 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
Bo5g110070.1 Rosmarinic Acid C4H low borderline
Bo5g110080.1 Rosmarinic Acid C4H low borderline
Bo5g110090.1 Rosmarinic Acid C4H medium pass
Bo5g111090.1 Rosmarinic Acid C4H low borderline
Bo5g111160.1 Rosmarinic Acid C4H low borderline
Bo5g111220.1 Rosmarinic Acid C4H low borderline
Bo5g115340.1 Rosmarinic Acid C4H low borderline
Bo5g128960.1 Rosmarinic Acid C4H low borderline
Bo5g129010.1 Rosmarinic Acid C4H low borderline
Bo5g129150.1 Rosmarinic Acid C4H low borderline
Bo5g129170.1 Rosmarinic Acid C4H low borderline
Bo5g129180.1 Rosmarinic Acid C4H low borderline
Bo5g132180.1 Rosmarinic Acid C4H low borderline
Bo5g137290.1 Rosmarinic Acid C4H low borderline
Bo6g022290.1 Rosmarinic Acid C4H low borderline
Bo6g056440.1 Rosmarinic Acid C4H low borderline
Bo6g067160.1 Rosmarinic Acid C4H low borderline
Bo6g067290.1 Rosmarinic Acid C4H low borderline
Bo6g072230.1 Rosmarinic Acid C4H low borderline
Bo6g086930.1 Rosmarinic Acid C4H medium pass
Bo6g092990.1 Rosmarinic Acid C4H low borderline
Bo6g095040.1 Rosmarinic Acid C4H low borderline
Bo6g095050.1 Rosmarinic Acid C4H medium pass
Bo6g108940.1 Rosmarinic Acid C4H low borderline
Bo6g116740.1 Rosmarinic Acid C4H low borderline
Bo6g118390.1 Rosmarinic Acid C4H low borderline
Bo6g119270.1 Rosmarinic Acid C4H low borderline
Bo7g011680.1 Rosmarinic Acid C4H low borderline
Bo7g016120.1 Rosmarinic Acid C4H low borderline
Bo7g040380.1 Rosmarinic Acid C4H low borderline
Bo7g040400.1 Rosmarinic Acid C4H low borderline
Bo7g045690.1 Rosmarinic Acid C4H low borderline
Bo7g045700.1 Rosmarinic Acid C4H low borderline
Bo7g063750.1 Rosmarinic Acid C4H medium pass
Bo7g063790.1 Rosmarinic Acid C4H medium pass
Bo7g063800.1 Rosmarinic Acid C4H low borderline
Bo7g063820.1 Rosmarinic Acid C4H medium pass
Bo7g067770.1 Rosmarinic Acid C4H medium pass
Bo7g071430.1 Rosmarinic Acid C4H low borderline
Bo7g082030.1 Rosmarinic Acid C4H low borderline
Bo7g082450.1 Rosmarinic Acid C4H low borderline
Bo7g082460.1 Rosmarinic Acid C4H medium pass
Bo7g082480.1 Rosmarinic Acid C4H medium pass
Bo7g082490.1 Rosmarinic Acid C4H medium pass
Bo7g082500.1 Rosmarinic Acid C4H low borderline
Bo7g082520.1 Rosmarinic Acid C4H low borderline
Bo7g082540.1 Rosmarinic Acid C4H low borderline
Bo7g082560.1 Rosmarinic Acid C4H medium pass
Bo7g082570.1 Rosmarinic Acid C4H low borderline
Bo7g082580.1 Rosmarinic Acid C4H low borderline