PlantSME Plant secondary metabolism enzyme database

Brassica oleracea (brassica_oleracea)

Imported from atlas release summary for Brassica oleracea.

2915
Candidate Protein Records
2262
Pathway-Level Records
5805
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 710 22 BAHD (286) View species results
Alkaloid pathway 489 23 7DLGT (81) View species results
Phenylpropanoid pathway 475 12 POD (207) View species results
Flavonoid pathway 262 13 UFGT (166) View species results
Rosmarinic acid pathway 181 7 C4H (74) View species results
Steroid pathway 145 14 SMT1/SMT2/SMT3 (52) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2296 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 422 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Bo9g053340.1 Steroid DWF4/CYP90B1 low borderline
Bo9g053360.1 Steroid DWF4/CYP90B1 low borderline
Bo9g113890.1 Steroid DWF4/CYP90B1 low borderline
Bo9g131960.1 Steroid DWF4/CYP90B1 low borderline
Bo9g165940.1 Steroid DWF4/CYP90B1 medium borderline
Bo9g171920.1 Steroid DWF4/CYP90B1 low borderline
Bo9g174880.1 Steroid DWF4/CYP90B1 low borderline
Bo9g178930.1 Steroid DWF4/CYP90B1 medium borderline
Bo9g181200.1 Steroid DWF4/CYP90B1 low borderline
Bo3g179470.1 Steroid DWF5 medium borderline
Bo5g078790.1 Steroid DWF5 medium pass
Bo5g145010.1 Steroid DWF5 low borderline
Bo1g156260.1 Steroid DWF7 medium pass
Bo1g156270.1 Steroid DWF7 medium pass
Bo3g055720.1 Steroid DWF7 medium pass
Bo3g055730.1 Steroid DWF7 medium pass
Bo3g055740.1 Steroid DWF7 medium pass
Bo4g035150.1 Steroid DWF7 low borderline
Bo5g152600.1 Steroid DWF7 medium pass
Bo4g122940.1 Steroid FK high pass
Bo6g067050.1 Steroid FK high pass
Bo3g138430.1 Steroid HYD1 low borderline
Bo5g029120.1 Steroid HYD1 medium pass
Bo1g005700.1 Steroid ROT3/CYP90C1 medium borderline
Bo3g003220.1 Steroid ROT3/CYP90C1 low borderline
Bo4g045970.1 Steroid ROT3/CYP90C1 medium borderline
Bo4g195610.1 Steroid ROT3/CYP90C1 medium borderline
Bo5g005280.1 Steroid ROT3/CYP90C1 medium borderline
Bo5g019750.1 Steroid ROT3/CYP90C1 low borderline
Bo6g116740.1 Steroid ROT3/CYP90C1 medium borderline
Bo7g117920.1 Steroid ROT3/CYP90C1 medium borderline
Bo8g068600.1 Steroid ROT3/CYP90C1 medium borderline
Bo8g068720.1 Steroid ROT3/CYP90C1 low borderline
Bo1g029610.1 Steroid SMO1/SMO2 low borderline
Bo1g030620.1 Steroid SMO1/SMO2 medium pass
Bo1g050760.1 Steroid SMO1/SMO2 medium pass
Bo2g105360.1 Steroid SMO1/SMO2 medium pass
Bo4g169320.1 Steroid SMO1/SMO2 medium pass
Bo5g008200.1 Steroid SMO1/SMO2 medium pass
Bo7g108180.1 Steroid SMO1/SMO2 medium pass
Bo8g009520.1 Steroid SMO1/SMO2 medium pass
Bo8g114090.1 Steroid SMO1/SMO2 medium pass
Bo00579s010.1 Steroid SMT1/SMT2/SMT3 low borderline
Bo02248s010.1 Steroid SMT1/SMT2/SMT3 medium pass
Bo1g011840.1 Steroid SMT1/SMT2/SMT3 low borderline
Bo1g011860.1 Steroid SMT1/SMT2/SMT3 medium pass
Bo1g094720.1 Steroid SMT1/SMT2/SMT3 medium pass
Bo1g119010.1 Steroid SMT1/SMT2/SMT3 low borderline
Bo1g122650.1 Steroid SMT1/SMT2/SMT3 medium pass
Bo1g139480.1 Steroid SMT1/SMT2/SMT3 low borderline