PlantSME Plant secondary metabolism enzyme database

Brassica oleracea (brassica_oleracea)

Imported from atlas release summary for Brassica oleracea.

2915
Candidate Protein Records
2262
Pathway-Level Records
5805
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 710 22 BAHD (286) View species results
Alkaloid pathway 489 23 7DLGT (81) View species results
Phenylpropanoid pathway 475 12 POD (207) View species results
Flavonoid pathway 262 13 UFGT (166) View species results
Rosmarinic acid pathway 181 7 C4H (74) View species results
Steroid pathway 145 14 SMT1/SMT2/SMT3 (52) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2296 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 422 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
Bo8g061290.1 Terpenoid CYP76 low borderline
Bo8g065240.1 Terpenoid CYP76 low borderline
Bo8g068600.1 Terpenoid CYP76 low borderline
Bo8g080080.1 Terpenoid CYP76 low borderline
Bo8g082650.1 Terpenoid CYP76 medium borderline
Bo8g095620.1 Terpenoid CYP76 medium borderline
Bo8g097370.1 Terpenoid CYP76 medium pass
Bo8g099980.1 Terpenoid CYP76 medium pass
Bo8g100080.1 Terpenoid CYP76 low borderline
Bo8g100560.1 Terpenoid CYP76 medium pass
Bo8g100820.1 Terpenoid CYP76 medium pass
Bo8g107290.1 Terpenoid CYP76 medium pass
Bo8g107640.1 Terpenoid CYP76 medium pass
Bo8g107710.1 Terpenoid CYP76 medium pass
Bo8g108830.1 Terpenoid CYP76 low borderline
Bo8g117730.1 Terpenoid CYP76 medium pass
Bo8g117940.1 Terpenoid CYP76 low borderline
Bo9g002280.1 Terpenoid CYP76 low borderline
Bo9g007830.1 Terpenoid CYP76 medium borderline
Bo9g008590.1 Terpenoid CYP76 medium borderline
Bo9g011470.1 Terpenoid CYP76 medium pass
Bo9g025970.1 Terpenoid CYP76 medium borderline
Bo9g027440.1 Terpenoid CYP76 medium pass
Bo9g043750.1 Terpenoid CYP76 medium borderline
Bo9g043820.1 Terpenoid CYP76 medium pass
Bo9g043840.1 Terpenoid CYP76 medium borderline
Bo9g059420.1 Terpenoid CYP76 medium borderline
Bo9g076040.1 Terpenoid CYP76 low borderline
Bo9g094260.1 Terpenoid CYP76 medium borderline
Bo9g131960.1 Terpenoid CYP76 medium borderline
Bo9g165940.1 Terpenoid CYP76 low borderline
Bo9g171920.1 Terpenoid CYP76 medium pass
Bo9g173640.1 Terpenoid CYP76 medium pass
Bo9g174880.1 Terpenoid CYP76 medium borderline
Bo9g174900.1 Terpenoid CYP76 medium pass
Bo9g177000.1 Terpenoid CYP76 low borderline
Bo9g177260.1 Terpenoid CYP76 low borderline
Bo9g178930.1 Terpenoid CYP76 low borderline
Bo9g181190.1 Terpenoid CYP76 medium borderline
Bo9g181200.1 Terpenoid CYP76 low borderline
Bo3g107120.1 Terpenoid DXR high pass
Bo7g084020.1 Terpenoid DXR low borderline
Bo9g015200.1 Terpenoid DXR high pass
Bo1g056630.1 Terpenoid DXS medium pass
Bo3g078640.1 Terpenoid DXS medium pass
Bo7g103850.1 Terpenoid DXS medium pass
Bo9g171330.1 Terpenoid DXS low borderline
Bo01246s020.1 Terpenoid FPPS medium borderline
Bo2g028370.1 Terpenoid FPPS low borderline
Bo2g028380.1 Terpenoid FPPS medium pass