PlantSME Plant secondary metabolism enzyme database

Brassica oleracea (brassica_oleracea)

Imported from atlas release summary for Brassica oleracea.

2915
Candidate Protein Records
2262
Pathway-Level Records
5805
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 710 22 BAHD (286) View species results
Alkaloid pathway 489 23 7DLGT (81) View species results
Phenylpropanoid pathway 475 12 POD (207) View species results
Flavonoid pathway 262 13 UFGT (166) View species results
Rosmarinic acid pathway 181 7 C4H (74) View species results
Steroid pathway 145 14 SMT1/SMT2/SMT3 (52) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2296 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 422 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Bo9g135540.1 Alkaloid ISY medium pass
Bo01340s030.1 Alkaloid LAMT medium borderline
Bo01416s010.1 Alkaloid LAMT medium borderline
Bo01416s020.1 Alkaloid LAMT medium borderline
Bo01651s010.1 Alkaloid LAMT medium borderline
Bo01887s010.1 Alkaloid LAMT medium borderline
Bo06378s010.1 Alkaloid LAMT medium borderline
Bo1g044210.1 Alkaloid LAMT medium borderline
Bo1g084810.1 Alkaloid LAMT medium borderline
Bo2g053880.1 Alkaloid LAMT medium borderline
Bo3g002760.1 Alkaloid LAMT medium borderline
Bo3g021060.1 Alkaloid LAMT medium borderline
Bo3g064190.1 Alkaloid LAMT medium borderline
Bo3g154140.1 Alkaloid LAMT medium borderline
Bo3g154150.1 Alkaloid LAMT medium borderline
Bo5g020560.1 Alkaloid LAMT medium borderline
Bo5g136520.1 Alkaloid LAMT medium borderline
Bo6g101070.1 Alkaloid LAMT medium pass
Bo6g101200.1 Alkaloid LAMT medium pass
Bo6g106490.1 Alkaloid LAMT medium borderline
Bo7g016400.1 Alkaloid LAMT medium borderline
Bo7g062260.1 Alkaloid LAMT medium borderline
Bo7g117980.1 Alkaloid LAMT medium borderline
Bo8g051320.1 Alkaloid LAMT low borderline
Bo8g054440.1 Alkaloid LAMT medium borderline
Bo8g080420.1 Alkaloid LAMT medium borderline
Bo8g080430.1 Alkaloid LAMT low borderline
Bo8g101030.1 Alkaloid LAMT medium borderline
Bo9g120300.1 Alkaloid LAMT medium borderline
Bo9g180070.1 Alkaloid LAMT medium borderline
Bo9g180100.1 Alkaloid LAMT medium borderline
Bo1g057280.1 Alkaloid MPO medium pass
Bo2g105250.1 Alkaloid MPO medium pass
Bo2g105280.1 Alkaloid MPO low borderline
Bo2g105290.1 Alkaloid MPO low borderline
Bo2g105300.1 Alkaloid MPO low borderline
Bo3g036050.1 Alkaloid MPO high pass
Bo3g184110.1 Alkaloid MPO low borderline
Bo4g094180.1 Alkaloid MPO low borderline
Bo4g154210.1 Alkaloid MPO low borderline
Bo4g191620.1 Alkaloid MPO high pass
Bo5g043340.1 Alkaloid MPO low borderline
Bo7g040950.1 Alkaloid MPO medium pass
Bo8g032130.1 Alkaloid MPO low borderline
Bo8g032140.1 Alkaloid MPO low borderline
Bo00852s020.1 Alkaloid NCS medium borderline
Bo02353s010.1 Alkaloid NCS medium borderline
Bo1g023950.1 Alkaloid NCS medium borderline
Bo1g070600.1 Alkaloid NCS medium borderline
Bo2g028460.1 Alkaloid NCS medium borderline