PlantSME Plant secondary metabolism enzyme database

Brassica oleracea (brassica_oleracea)

Imported from atlas release summary for Brassica oleracea.

2915
Candidate Protein Records
2262
Pathway-Level Records
5805
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 710 22 BAHD (286) View species results
Alkaloid pathway 489 23 7DLGT (81) View species results
Phenylpropanoid pathway 475 12 POD (207) View species results
Flavonoid pathway 262 13 UFGT (166) View species results
Rosmarinic acid pathway 181 7 C4H (74) View species results
Steroid pathway 145 14 SMT1/SMT2/SMT3 (52) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2296 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 422 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
Bo3g021910.1 Terpenoid HMGR low borderline
Bo3g021950.1 Terpenoid HMGR low borderline
Bo3g032210.1 Terpenoid HMGR low borderline
Bo3g036910.1 Terpenoid HMGR medium pass
Bo3g045290.1 Terpenoid HMGR low borderline
Bo3g132790.1 Terpenoid HMGR low borderline
Bo3g141400.1 Terpenoid HMGR low borderline
Bo3g153610.1 Terpenoid HMGR medium pass
Bo3g169380.1 Terpenoid HMGR medium pass
Bo4g026500.1 Terpenoid HMGR medium pass
Bo4g052030.1 Terpenoid HMGR medium pass
Bo4g061150.1 Terpenoid HMGR medium pass
Bo4g075510.1 Terpenoid HMGR low borderline
Bo4g108230.1 Terpenoid HMGR low borderline
Bo4g149540.1 Terpenoid HMGR low borderline
Bo5g040960.1 Terpenoid HMGR low borderline
Bo5g128790.1 Terpenoid HMGR medium pass
Bo5g133300.1 Terpenoid HMGR medium pass
Bo5g136500.1 Terpenoid HMGR medium pass
Bo6g018320.1 Terpenoid HMGR medium pass
Bo6g018490.1 Terpenoid HMGR medium pass
Bo6g030930.1 Terpenoid HMGR low borderline
Bo6g077580.1 Terpenoid HMGR low borderline
Bo6g098630.1 Terpenoid HMGR low borderline
Bo6g120590.1 Terpenoid HMGR medium pass
Bo7g014600.1 Terpenoid HMGR medium pass
Bo7g014790.1 Terpenoid HMGR low borderline
Bo7g056380.1 Terpenoid HMGR medium pass
Bo8g016430.1 Terpenoid HMGR medium pass
Bo8g016470.1 Terpenoid HMGR low borderline
Bo9g069610.1 Terpenoid HMGR medium pass
Bo9g153770.1 Terpenoid HMGR low borderline
Bo2g107530.1 Terpenoid HMGS high pass
Bo9g093840.1 Terpenoid HMGS high pass
Bo00946s040.1 Terpenoid IDI low borderline
Bo1g155140.1 Terpenoid IDI medium pass
Bo2g075270.1 Terpenoid IDI medium pass
Bo2g149740.1 Terpenoid IDI low borderline
Bo3g012030.1 Terpenoid IDI medium pass
Bo3g055830.1 Terpenoid IDI medium pass
Bo5g151500.1 Terpenoid IDI medium pass
Bo2g121150.1 Terpenoid MCT/IspD low borderline
Bo2g136340.1 Terpenoid MCT/IspD high pass
Bo4g039080.1 Terpenoid MCT/IspD low borderline
Bo5g065700.1 Terpenoid MCT/IspD low borderline
Bo4g096910.1 Terpenoid MDS/IspF high pass
Bo9g030600.1 Terpenoid MDS/IspF high pass
Bo9g033940.1 Terpenoid MDS/IspF high pass
Bo2g006660.1 Terpenoid MVD low borderline
Bo3g002950.1 Terpenoid MVD low borderline