PlantSME Plant secondary metabolism enzyme database

Brassica oleracea (brassica_oleracea)

Imported from atlas release summary for Brassica oleracea.

2262
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 710 22 BAHD (286) View species results
Alkaloid pathway 489 23 7DLGT (81) View species results
Phenylpropanoid pathway 475 12 POD (207) View species results
Flavonoid pathway 262 13 UFGT (166) View species results
Rosmarinic acid pathway 181 7 C4H (74) View species results
Steroid pathway 145 14 SMT1/SMT2/SMT3 (52) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2296 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 422 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Bo1g007630.1 Alkaloid 7DLGT low borderline
Bo1g014720.1 Alkaloid 7DLGT low borderline
Bo1g056640.1 Alkaloid 7DLGT medium pass
Bo1g056740.1 Alkaloid 7DLGT low borderline
Bo1g056750.1 Alkaloid 7DLGT low borderline
Bo1g056760.1 Alkaloid 7DLGT medium pass
Bo1g056770.1 Alkaloid 7DLGT low borderline
Bo1g056800.1 Alkaloid 7DLGT low borderline
Bo1g057030.1 Alkaloid 7DLGT low borderline
Bo1g062660.1 Alkaloid 7DLGT medium pass
Bo1g070870.1 Alkaloid 7DLGT medium pass
Bo1g070880.1 Alkaloid 7DLGT high pass
Bo1g094250.1 Alkaloid 7DLGT medium pass
Bo1g104930.1 Alkaloid 7DLGT medium pass
Bo1g105610.1 Alkaloid 7DLGT medium pass
Bo1g105660.1 Alkaloid 7DLGT medium pass
Bo1g105850.1 Alkaloid 7DLGT low borderline
Bo2g026640.1 Alkaloid 7DLGT medium pass
Bo2g042220.1 Alkaloid 7DLGT low borderline
Bo2g042230.1 Alkaloid 7DLGT low borderline
Bo2g042240.1 Alkaloid 7DLGT low borderline
Bo2g093320.1 Alkaloid 7DLGT medium pass
Bo2g098920.1 Alkaloid 7DLGT medium pass
Bo2g098930.1 Alkaloid 7DLGT high pass
Bo3g002360.1 Alkaloid 7DLGT low borderline
Bo3g003530.1 Alkaloid 7DLGT high pass
Bo3g003590.1 Alkaloid 7DLGT medium pass
Bo3g009950.1 Alkaloid 7DLGT low borderline
Bo3g018000.1 Alkaloid 7DLGT medium pass
Bo3g022310.1 Alkaloid 7DLGT low borderline
Bo3g022320.1 Alkaloid 7DLGT low borderline
Bo3g022330.1 Alkaloid 7DLGT low borderline
Bo3g022360.1 Alkaloid 7DLGT low borderline
Bo3g022430.1 Alkaloid 7DLGT low borderline
Bo3g024360.1 Alkaloid 7DLGT low borderline
Bo3g026420.1 Alkaloid 7DLGT medium pass
Bo3g030280.1 Alkaloid 7DLGT medium pass
Bo3g030290.1 Alkaloid 7DLGT low borderline
Bo3g030310.1 Alkaloid 7DLGT medium pass
Bo3g036870.1 Alkaloid 7DLGT low borderline
Bo3g036890.1 Alkaloid 7DLGT low borderline
Bo3g036900.1 Alkaloid 7DLGT low borderline
Bo3g036930.1 Alkaloid 7DLGT low borderline
Bo3g039900.1 Alkaloid 7DLGT low borderline
Bo3g041900.1 Alkaloid 7DLGT medium pass
Bo3g054450.1 Alkaloid 7DLGT high pass
Bo3g065540.1 Alkaloid 7DLGT low borderline
Bo3g078820.1 Alkaloid 7DLGT medium pass
Bo3g078830.1 Alkaloid 7DLGT low borderline
Bo3g078870.1 Alkaloid 7DLGT low borderline