PlantSME Plant secondary metabolism enzyme database

Brassica oleracea (brassica_oleracea)

Imported from atlas release summary for Brassica oleracea.

2915
Candidate Protein Records
2262
Pathway-Level Records
5805
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 710 22 BAHD (286) View species results
Alkaloid pathway 489 23 7DLGT (81) View species results
Phenylpropanoid pathway 475 12 POD (207) View species results
Flavonoid pathway 262 13 UFGT (166) View species results
Rosmarinic acid pathway 181 7 C4H (74) View species results
Steroid pathway 145 14 SMT1/SMT2/SMT3 (52) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2296 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 422 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Bo7g061510.1 Rosmarinic Acid 4CL medium pass
Bo7g061530.1 Rosmarinic Acid 4CL medium pass
Bo7g093680.1 Rosmarinic Acid 4CL low borderline
Bo8g070180.1 Rosmarinic Acid 4CL medium pass
Bo8g070200.1 Rosmarinic Acid 4CL medium pass
Bo8g070210.1 Rosmarinic Acid 4CL medium pass
Bo8g070220.1 Rosmarinic Acid 4CL low borderline
Bo8g070230.1 Rosmarinic Acid 4CL medium pass
Bo8g070240.1 Rosmarinic Acid 4CL medium pass
Bo8g077450.1 Rosmarinic Acid 4CL medium pass
Bo9g028700.1 Rosmarinic Acid 4CL low borderline
Bo9g030940.1 Rosmarinic Acid 4CL low borderline
Bo9g076260.1 Rosmarinic Acid 4CL medium pass
Bo9g076270.1 Rosmarinic Acid 4CL medium pass
Bo9g090940.1 Rosmarinic Acid 4CL low borderline
Bo9g159700.1 Rosmarinic Acid 4CL medium pass
Bo01007s020.1 Rosmarinic Acid C4H low borderline
Bo01007s030.1 Rosmarinic Acid C4H low borderline
Bo01172s030.1 Rosmarinic Acid C4H medium pass
Bo01224s050.1 Rosmarinic Acid C4H low borderline
Bo01244s010.1 Rosmarinic Acid C4H low borderline
Bo01374s020.1 Rosmarinic Acid C4H low borderline
Bo01514s010.1 Rosmarinic Acid C4H low borderline
Bo02165s020.1 Rosmarinic Acid C4H low borderline
Bo02408s010.1 Rosmarinic Acid C4H medium pass
Bo02541s010.1 Rosmarinic Acid C4H low borderline
Bo03142s010.1 Rosmarinic Acid C4H low borderline
Bo05126s010.1 Rosmarinic Acid C4H low borderline
Bo08912s010.1 Rosmarinic Acid C4H low borderline
Bo09649s010.1 Rosmarinic Acid C4H medium pass
Bo14869s010.1 Rosmarinic Acid C4H low borderline
Bo1g002560.1 Rosmarinic Acid C4H low borderline
Bo1g002970.1 Rosmarinic Acid C4H low borderline
Bo1g003680.1 Rosmarinic Acid C4H low borderline
Bo1g003710.1 Rosmarinic Acid C4H low borderline
Bo1g004730.1 Rosmarinic Acid C4H low borderline
Bo1g004740.1 Rosmarinic Acid C4H medium pass
Bo1g004770.1 Rosmarinic Acid C4H low borderline
Bo1g004780.1 Rosmarinic Acid C4H low borderline
Bo1g004790.1 Rosmarinic Acid C4H low borderline
Bo1g004840.1 Rosmarinic Acid C4H medium pass
Bo1g005700.1 Rosmarinic Acid C4H low borderline
Bo1g005770.1 Rosmarinic Acid C4H low borderline
Bo1g011220.1 Rosmarinic Acid C4H medium pass
Bo1g011270.1 Rosmarinic Acid C4H medium pass
Bo1g020370.1 Rosmarinic Acid C4H low borderline
Bo1g022250.1 Rosmarinic Acid C4H low borderline
Bo1g022260.1 Rosmarinic Acid C4H medium pass
Bo1g028540.1 Rosmarinic Acid C4H medium pass
Bo1g039390.1 Rosmarinic Acid C4H low borderline