PlantSME Plant secondary metabolism enzyme database

Brassica oleracea (brassica_oleracea)

Imported from atlas release summary for Brassica oleracea.

2915
Candidate Protein Records
2262
Pathway-Level Records
5805
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 710 22 BAHD (286) View species results
Alkaloid pathway 489 23 7DLGT (81) View species results
Phenylpropanoid pathway 475 12 POD (207) View species results
Flavonoid pathway 262 13 UFGT (166) View species results
Rosmarinic acid pathway 181 7 C4H (74) View species results
Steroid pathway 145 14 SMT1/SMT2/SMT3 (52) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2296 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 422 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Bo9g115050.1 Alkaloid NMT medium borderline
Bo9g115070.1 Alkaloid NMT medium borderline
Bo9g117310.1 Alkaloid NMT medium pass
Bo9g117320.1 Alkaloid NMT medium pass
Bo9g152300.1 Alkaloid NMT medium borderline
Bo9g173770.1 Alkaloid NMT medium pass
Bo9g173800.1 Alkaloid NMT medium pass
Bo9g177540.1 Alkaloid NMT low borderline
Bo01008s010.1 Alkaloid PMT low borderline
Bo01250s010.1 Alkaloid PMT medium pass
Bo1g055210.1 Alkaloid PMT low borderline
Bo2g018140.1 Alkaloid PMT medium pass
Bo2g046140.1 Alkaloid PMT medium borderline
Bo3g103300.1 Alkaloid PMT low borderline
Bo5g039840.1 Alkaloid PMT medium borderline
Bo5g149890.1 Alkaloid PMT medium pass
Bo7g003460.1 Alkaloid PMT low borderline
Bo7g055940.1 Alkaloid PMT medium borderline
Bo7g055950.1 Alkaloid PMT medium borderline
Bo7g055960.1 Alkaloid PMT medium borderline
Bo8g074990.1 Alkaloid PMT medium borderline
Bo8g077250.1 Alkaloid PMT low borderline
Bo9g109790.1 Alkaloid PMT medium borderline
Bo9g153630.1 Alkaloid PMT low borderline
Bo1g007470.1 Alkaloid PYKS low borderline
Bo1g150220.1 Alkaloid PYKS low borderline
Bo2g006590.1 Alkaloid PYKS low borderline
Bo2g059020.1 Alkaloid PYKS low borderline
Bo2g120530.1 Alkaloid PYKS low borderline
Bo2g146220.1 Alkaloid PYKS medium pass
Bo2g150150.1 Alkaloid PYKS medium pass
Bo2g150170.1 Alkaloid PYKS high pass
Bo2g150450.1 Alkaloid PYKS low borderline
Bo3g001080.1 Alkaloid PYKS low borderline
Bo3g009440.1 Alkaloid PYKS high pass
Bo3g042110.1 Alkaloid PYKS high pass
Bo3g052930.1 Alkaloid PYKS medium pass
Bo3g090150.1 Alkaloid PYKS low borderline
Bo3g090160.1 Alkaloid PYKS low borderline
Bo3g168810.1 Alkaloid PYKS low borderline
Bo3g168840.1 Alkaloid PYKS low borderline
Bo4g007020.1 Alkaloid PYKS low borderline
Bo4g070300.1 Alkaloid PYKS low borderline
Bo4g160090.1 Alkaloid PYKS low borderline
Bo4g166590.1 Alkaloid PYKS low borderline
Bo4g187290.1 Alkaloid PYKS high pass
Bo5g002690.1 Alkaloid PYKS low borderline
Bo5g004380.1 Alkaloid PYKS low borderline
Bo5g008500.1 Alkaloid PYKS low borderline
Bo5g027470.1 Alkaloid PYKS low borderline