PlantSME Plant secondary metabolism enzyme database

Brassica oleracea (brassica_oleracea)

Imported from atlas release summary for Brassica oleracea.

2262
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 710 22 BAHD (286) View species results
Alkaloid pathway 489 23 7DLGT (81) View species results
Phenylpropanoid pathway 475 12 POD (207) View species results
Flavonoid pathway 262 13 UFGT (166) View species results
Rosmarinic acid pathway 181 7 C4H (74) View species results
Steroid pathway 145 14 SMT1/SMT2/SMT3 (52) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2296 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 422 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Bo1g084560.1 Flavonoid ANS/LDOX low borderline
Bo2g093440.1 Flavonoid ANS/LDOX medium borderline
Bo3g018010.1 Flavonoid ANS/LDOX low borderline
Bo3g019590.1 Flavonoid ANS/LDOX low borderline
Bo3g027760.1 Flavonoid ANS/LDOX medium borderline
Bo3g030180.1 Flavonoid ANS/LDOX low borderline
Bo3g032260.1 Flavonoid ANS/LDOX medium pass
Bo3g162710.1 Flavonoid ANS/LDOX low borderline
Bo4g014750.1 Flavonoid ANS/LDOX medium borderline
Bo4g039720.1 Flavonoid ANS/LDOX medium borderline
Bo4g097070.1 Flavonoid ANS/LDOX low borderline
Bo4g182720.1 Flavonoid ANS/LDOX medium borderline
Bo5g003140.1 Flavonoid ANS/LDOX medium borderline
Bo5g003850.1 Flavonoid ANS/LDOX low borderline
Bo5g062250.1 Flavonoid ANS/LDOX medium borderline
Bo5g072380.1 Flavonoid ANS/LDOX medium borderline
Bo6g122040.1 Flavonoid ANS/LDOX medium borderline
Bo6g122110.1 Flavonoid ANS/LDOX medium borderline
Bo6g125640.1 Flavonoid ANS/LDOX medium borderline
Bo8g077920.1 Flavonoid ANS/LDOX medium borderline
Bo8g105200.1 Flavonoid ANS/LDOX medium borderline
Bo8g114510.1 Flavonoid ANS/LDOX medium borderline
Bo9g113850.1 Flavonoid ANS/LDOX medium borderline
Bo9g175240.1 Flavonoid ANS/LDOX medium borderline
Bo9g175530.1 Flavonoid ANS/LDOX low borderline
Bo1g022250.1 Flavonoid C4H low borderline
Bo1g056950.1 Flavonoid C4H low borderline
Bo1g057010.1 Flavonoid C4H low borderline
Bo23509s010.1 Flavonoid C4H low borderline
Bo3g049950.1 Flavonoid C4H low borderline
Bo4g173070.1 Flavonoid C4H medium borderline
Bo4g173080.1 Flavonoid C4H medium borderline
Bo5g052100.1 Flavonoid C4H medium borderline
Bo7g095640.1 Flavonoid C4H medium borderline
Bo7g103690.1 Flavonoid C4H low borderline
Bo3g024990.1 Flavonoid CHI low borderline
Bo4g052620.1 Flavonoid CHI low borderline
Bo6g068550.1 Flavonoid CHI medium pass
Bo7g117570.1 Flavonoid CHI medium pass
Bo8g088480.1 Flavonoid CHI medium pass
Bo8g089480.1 Flavonoid CHI medium pass
Bo9g177250.1 Flavonoid CHI medium pass
Bo2g146220.1 Flavonoid CHS medium pass
Bo2g150150.1 Flavonoid CHS medium pass
Bo2g150170.1 Flavonoid CHS medium pass
Bo3g009440.1 Flavonoid CHS medium pass
Bo3g042110.1 Flavonoid CHS medium pass
Bo3g052930.1 Flavonoid CHS medium pass
Bo4g187290.1 Flavonoid CHS medium pass
Bo7g117110.1 Flavonoid CHS medium pass