PlantSME Plant secondary metabolism enzyme database

Brassica oleracea (brassica_oleracea)

Imported from atlas release summary for Brassica oleracea.

2915
Candidate Protein Records
2262
Pathway-Level Records
5805
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 710 22 BAHD (286) View species results
Alkaloid pathway 489 23 7DLGT (81) View species results
Phenylpropanoid pathway 475 12 POD (207) View species results
Flavonoid pathway 262 13 UFGT (166) View species results
Rosmarinic acid pathway 181 7 C4H (74) View species results
Steroid pathway 145 14 SMT1/SMT2/SMT3 (52) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2296 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 422 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Bo2g159250.1 Rosmarinic Acid C4H low borderline
Bo3g002910.1 Rosmarinic Acid C4H low borderline
Bo3g003040.1 Rosmarinic Acid C4H low borderline
Bo3g003600.1 Rosmarinic Acid C4H low borderline
Bo3g019410.1 Rosmarinic Acid C4H low borderline
Bo3g019420.1 Rosmarinic Acid C4H medium pass
Bo3g022350.1 Rosmarinic Acid C4H low borderline
Bo3g024650.1 Rosmarinic Acid C4H medium pass
Bo3g024670.1 Rosmarinic Acid C4H medium pass
Bo3g024820.1 Rosmarinic Acid C4H medium pass
Bo3g026980.1 Rosmarinic Acid C4H low borderline
Bo3g035250.1 Rosmarinic Acid C4H medium pass
Bo3g037780.1 Rosmarinic Acid C4H low borderline
Bo3g038840.1 Rosmarinic Acid C4H low borderline
Bo3g042090.1 Rosmarinic Acid C4H low borderline
Bo3g042280.1 Rosmarinic Acid C4H low borderline
Bo3g045640.1 Rosmarinic Acid C4H low borderline
Bo3g047120.1 Rosmarinic Acid C4H low borderline
Bo3g049910.1 Rosmarinic Acid C4H medium pass
Bo3g049950.1 Rosmarinic Acid C4H low borderline
Bo3g051010.1 Rosmarinic Acid C4H low borderline
Bo3g057070.1 Rosmarinic Acid C4H medium pass
Bo3g057080.1 Rosmarinic Acid C4H low borderline
Bo3g066310.1 Rosmarinic Acid C4H low borderline
Bo3g066340.1 Rosmarinic Acid C4H low borderline
Bo3g066350.1 Rosmarinic Acid C4H low borderline
Bo3g066370.1 Rosmarinic Acid C4H low borderline
Bo3g073070.1 Rosmarinic Acid C4H low borderline
Bo3g074680.1 Rosmarinic Acid C4H low borderline
Bo3g074690.1 Rosmarinic Acid C4H low borderline
Bo3g074700.1 Rosmarinic Acid C4H low borderline
Bo3g083900.1 Rosmarinic Acid C4H low borderline
Bo3g088270.1 Rosmarinic Acid C4H low borderline
Bo3g093960.1 Rosmarinic Acid C4H medium pass
Bo3g094210.1 Rosmarinic Acid C4H low borderline
Bo3g113300.1 Rosmarinic Acid C4H low borderline
Bo3g113580.1 Rosmarinic Acid C4H low borderline
Bo3g144080.1 Rosmarinic Acid C4H low borderline
Bo3g151200.1 Rosmarinic Acid C4H low borderline
Bo3g151230.1 Rosmarinic Acid C4H low borderline
Bo3g151260.1 Rosmarinic Acid C4H low borderline
Bo3g152800.1 Rosmarinic Acid C4H low borderline
Bo3g153450.1 Rosmarinic Acid C4H low borderline
Bo3g153480.1 Rosmarinic Acid C4H low borderline
Bo3g153490.1 Rosmarinic Acid C4H low borderline
Bo3g153510.1 Rosmarinic Acid C4H medium pass
Bo3g162120.1 Rosmarinic Acid C4H medium pass
Bo3g165550.1 Rosmarinic Acid C4H medium pass
Bo3g173550.1 Rosmarinic Acid C4H low borderline
Bo3g176040.1 Rosmarinic Acid C4H low borderline