PlantSME Plant secondary metabolism enzyme database

Brassica oleracea (brassica_oleracea)

Imported from atlas release summary for Brassica oleracea.

2262
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 710 22 BAHD (286) View species results
Alkaloid pathway 489 23 7DLGT (81) View species results
Phenylpropanoid pathway 475 12 POD (207) View species results
Flavonoid pathway 262 13 UFGT (166) View species results
Rosmarinic acid pathway 181 7 C4H (74) View species results
Steroid pathway 145 14 SMT1/SMT2/SMT3 (52) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2296 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 422 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Bo9g165610.1 Alkaloid 7DLGT low borderline
Bo9g169250.1 Alkaloid 7DLGT medium pass
Bo9g176750.1 Alkaloid 7DLGT high pass
Bo9g176760.1 Alkaloid 7DLGT high pass
Bo9g176770.1 Alkaloid 7DLGT high pass
Bo9g176780.1 Alkaloid 7DLGT high pass
Bo9g176790.1 Alkaloid 7DLGT high pass
Bo9g176800.1 Alkaloid 7DLGT medium pass
Bo9g176810.1 Alkaloid 7DLGT high pass
Bo9g176820.1 Alkaloid 7DLGT high pass
Bo00948s050.1 Alkaloid 7DLH medium borderline
Bo01058s020.1 Alkaloid 7DLH low borderline
Bo01512s010.1 Alkaloid 7DLH medium pass
Bo01910s010.1 Alkaloid 7DLH medium pass
Bo03142s010.1 Alkaloid 7DLH medium borderline
Bo09470s010.1 Alkaloid 7DLH medium borderline
Bo1g130050.1 Alkaloid 7DLH low borderline
Bo2g028280.1 Alkaloid 7DLH medium borderline
Bo2g047820.1 Alkaloid 7DLH medium borderline
Bo33282s010.1 Alkaloid 7DLH low borderline
Bo3g023170.1 Alkaloid 7DLH medium borderline
Bo3g066310.1 Alkaloid 7DLH medium borderline
Bo3g066350.1 Alkaloid 7DLH medium borderline
Bo3g066360.1 Alkaloid 7DLH medium borderline
Bo3g066370.1 Alkaloid 7DLH medium borderline
Bo4g025120.1 Alkaloid 7DLH medium borderline
Bo4g137530.1 Alkaloid 7DLH medium borderline
Bo5g068170.1 Alkaloid 7DLH low borderline
Bo5g128980.1 Alkaloid 7DLH medium borderline
Bo6g018540.1 Alkaloid 7DLH medium pass
Bo6g018570.1 Alkaloid 7DLH medium borderline
Bo6g067160.1 Alkaloid 7DLH medium borderline
Bo7g016180.1 Alkaloid 7DLH low borderline
Bo7g096360.1 Alkaloid 7DLH medium borderline
Bo8g105160.1 Alkaloid 7DLH medium borderline
Bo8g105180.1 Alkaloid 7DLH medium borderline
Bo9g053270.1 Alkaloid 7DLH medium borderline
Bo9g172300.1 Alkaloid 7DLH medium borderline
Bo1g026920.1 Alkaloid 8HGO medium borderline
Bo2g159230.1 Alkaloid 8HGO medium borderline
Bo3g034550.1 Alkaloid 8HGO low borderline
Bo4g025780.1 Alkaloid 8HGO low borderline
Bo4g115470.1 Alkaloid 8HGO low borderline
Bo5g018110.1 Alkaloid 8HGO low borderline
Bo5g029130.1 Alkaloid 8HGO low borderline
Bo5g038520.1 Alkaloid 8HGO medium borderline
Bo5g049370.1 Alkaloid 8HGO medium borderline
Bo5g086890.1 Alkaloid 8HGO low borderline
Bo5g121410.1 Alkaloid 8HGO low borderline
Bo6g083440.1 Alkaloid 8HGO medium borderline