PlantSME Plant secondary metabolism enzyme database

Brassica oleracea (brassica_oleracea)

Imported from atlas release summary for Brassica oleracea.

2915
Candidate Protein Records
2262
Pathway-Level Records
5805
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 710 22 BAHD (286) View species results
Alkaloid pathway 489 23 7DLGT (81) View species results
Phenylpropanoid pathway 475 12 POD (207) View species results
Flavonoid pathway 262 13 UFGT (166) View species results
Rosmarinic acid pathway 181 7 C4H (74) View species results
Steroid pathway 145 14 SMT1/SMT2/SMT3 (52) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2296 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 422 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Bo5g030410.1 Rosmarinic Acid 4CL medium pass
Bo5g034540.1 Rosmarinic Acid 4CL medium pass
Bo5g063110.1 Rosmarinic Acid 4CL low borderline
Bo5g076220.1 Rosmarinic Acid 4CL low borderline
Bo5g102340.1 Rosmarinic Acid 4CL medium pass
Bo5g102350.1 Rosmarinic Acid 4CL medium pass
Bo5g102360.1 Rosmarinic Acid 4CL medium pass
Bo5g103380.1 Rosmarinic Acid 4CL medium pass
Bo5g103390.1 Rosmarinic Acid 4CL medium pass
Bo5g103450.1 Rosmarinic Acid 4CL medium pass
Bo5g103470.1 Rosmarinic Acid 4CL medium pass
Bo5g123600.1 Rosmarinic Acid 4CL medium pass
Bo5g126370.1 Rosmarinic Acid 4CL low borderline
Bo5g144910.1 Rosmarinic Acid 4CL low borderline
Bo6g042520.1 Rosmarinic Acid 4CL medium pass
Bo6g046680.1 Rosmarinic Acid 4CL low borderline
Bo6g083260.1 Rosmarinic Acid 4CL low borderline
Bo6g099190.1 Rosmarinic Acid 4CL medium pass
Bo6g099570.1 Rosmarinic Acid 4CL medium pass
Bo6g121190.1 Rosmarinic Acid 4CL medium pass
Bo7g003770.1 Rosmarinic Acid 4CL low borderline
Bo7g014250.1 Rosmarinic Acid 4CL medium pass
Bo7g061510.1 Rosmarinic Acid 4CL medium pass
Bo7g061530.1 Rosmarinic Acid 4CL medium pass
Bo7g093680.1 Rosmarinic Acid 4CL low borderline
Bo8g070180.1 Rosmarinic Acid 4CL medium pass
Bo8g070200.1 Rosmarinic Acid 4CL medium pass
Bo8g070210.1 Rosmarinic Acid 4CL medium pass
Bo8g070220.1 Rosmarinic Acid 4CL low borderline
Bo8g070230.1 Rosmarinic Acid 4CL medium pass
Bo8g070240.1 Rosmarinic Acid 4CL medium pass
Bo8g077450.1 Rosmarinic Acid 4CL medium pass
Bo9g028700.1 Rosmarinic Acid 4CL low borderline
Bo9g030940.1 Rosmarinic Acid 4CL low borderline
Bo9g076260.1 Rosmarinic Acid 4CL medium pass
Bo9g076270.1 Rosmarinic Acid 4CL medium pass
Bo9g090940.1 Rosmarinic Acid 4CL low borderline
Bo9g159700.1 Rosmarinic Acid 4CL medium pass
Bo01007s020.1 Rosmarinic Acid C4H low borderline
Bo01007s030.1 Rosmarinic Acid C4H low borderline
Bo01172s030.1 Rosmarinic Acid C4H medium pass
Bo01224s050.1 Rosmarinic Acid C4H low borderline
Bo01244s010.1 Rosmarinic Acid C4H low borderline
Bo01374s020.1 Rosmarinic Acid C4H low borderline
Bo01514s010.1 Rosmarinic Acid C4H low borderline
Bo02165s020.1 Rosmarinic Acid C4H low borderline
Bo02408s010.1 Rosmarinic Acid C4H medium pass
Bo02541s010.1 Rosmarinic Acid C4H low borderline
Bo03142s010.1 Rosmarinic Acid C4H low borderline
Bo05126s010.1 Rosmarinic Acid C4H low borderline