PlantSME Plant secondary metabolism enzyme database

Brassica oleracea (brassica_oleracea)

Imported from atlas release summary for Brassica oleracea.

2915
Candidate Protein Records
2262
Pathway-Level Records
5805
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 710 22 BAHD (286) View species results
Alkaloid pathway 489 23 7DLGT (81) View species results
Phenylpropanoid pathway 475 12 POD (207) View species results
Flavonoid pathway 262 13 UFGT (166) View species results
Rosmarinic acid pathway 181 7 C4H (74) View species results
Steroid pathway 145 14 SMT1/SMT2/SMT3 (52) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2296 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 422 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Bo1g056990.1 Rosmarinic Acid TAT medium pass
Bo1g057020.1 Rosmarinic Acid TAT medium pass
Bo2g002340.1 Rosmarinic Acid TAT low borderline
Bo2g042260.1 Rosmarinic Acid TAT medium pass
Bo2g096040.1 Rosmarinic Acid TAT medium pass
Bo3g024030.1 Rosmarinic Acid TAT medium pass
Bo3g034590.1 Rosmarinic Acid TAT low borderline
Bo3g041960.1 Rosmarinic Acid TAT medium pass
Bo3g165870.1 Rosmarinic Acid TAT medium pass
Bo3g166880.1 Rosmarinic Acid TAT medium pass
Bo3g166890.1 Rosmarinic Acid TAT medium pass
Bo4g025690.1 Rosmarinic Acid TAT low borderline
Bo4g149450.1 Rosmarinic Acid TAT low borderline
Bo4g151210.1 Rosmarinic Acid TAT low borderline
Bo4g188720.1 Rosmarinic Acid TAT low borderline
Bo5g021230.1 Rosmarinic Acid TAT low borderline
Bo5g069410.1 Rosmarinic Acid TAT low borderline
Bo5g132220.1 Rosmarinic Acid TAT medium pass
Bo6g056350.1 Rosmarinic Acid TAT medium pass
Bo6g080330.1 Rosmarinic Acid TAT medium pass
Bo6g125630.1 Rosmarinic Acid TAT medium pass
Bo7g003330.1 Rosmarinic Acid TAT medium pass
Bo7g003350.1 Rosmarinic Acid TAT medium pass
Bo7g003370.1 Rosmarinic Acid TAT medium pass
Bo7g108910.1 Rosmarinic Acid TAT medium pass
Bo7g108920.1 Rosmarinic Acid TAT medium pass
Bo7g113080.1 Rosmarinic Acid TAT medium pass
Bo7g113100.1 Rosmarinic Acid TAT medium pass
Bo8g099540.1 Rosmarinic Acid TAT medium pass
Bo8g101250.1 Rosmarinic Acid TAT low borderline
Bo8g102270.1 Rosmarinic Acid TAT medium pass
Bo01049s040.1 Steroid BR6OX1/CYP85A1 low borderline
Bo1g020370.1 Steroid BR6OX1/CYP85A1 medium borderline
Bo1g056950.1 Steroid BR6OX1/CYP85A1 medium borderline
Bo1g087810.1 Steroid BR6OX1/CYP85A1 low borderline
Bo3g026980.1 Steroid BR6OX1/CYP85A1 medium borderline
Bo3g042090.1 Steroid BR6OX1/CYP85A1 medium borderline
Bo3g049950.1 Steroid BR6OX1/CYP85A1 medium borderline
Bo3g083900.1 Steroid BR6OX1/CYP85A1 medium borderline
Bo3g113320.1 Steroid BR6OX1/CYP85A1 low borderline
Bo3g122110.1 Steroid BR6OX1/CYP85A1 low borderline
Bo4g017260.1 Steroid BR6OX1/CYP85A1 medium borderline
Bo4g039770.1 Steroid BR6OX1/CYP85A1 medium borderline
Bo4g065810.1 Steroid BR6OX1/CYP85A1 medium borderline
Bo4g100090.1 Steroid BR6OX1/CYP85A1 medium borderline
Bo4g168080.1 Steroid BR6OX1/CYP85A1 medium borderline
Bo5g115340.1 Steroid BR6OX1/CYP85A1 medium borderline
Bo7g019830.1 Steroid BR6OX1/CYP85A1 low borderline
Bo7g067770.1 Steroid BR6OX1/CYP85A1 medium borderline
Bo7g096210.1 Steroid BR6OX1/CYP85A1 medium borderline