PlantSME Plant secondary metabolism enzyme database

Bryhnia novae-angliae (bryhnia_novae_angliae)

Imported from atlas release summary for Bryhnia novae-angliae.

708
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Phenylpropanoid pathway 26.13% Terpenoid pathway 24.44% Alkaloid pathway 20.62% Flavonoid pathway 13.14% Rosmarinic acid pathway 10.45% Steroid pathway 5.23%
Family Distribution
C4H 6.82% C3'H/CYP98A 5.93% POD 5.54% BAHD 5.2% CYP76 4.64% 4CL 4.53% NMT 4.19% DWF4/CYP90B1 3.02%
Other Families 60.12%
More Families (94)
IFS 53 2.96% F3H 48 2.68% T3O 45 2.52% BR6OX2/CYP85A2 41 2.29% F3'H/CYP75B 40 2.24% UGT 40 2.24% IFR 38 2.13% 7DLGT 37 2.07% UFGT 37 2.07% PAL 36 2.01% STR 35 1.96% GS 35 1.96% IO 30 1.68% CODM/T6ODM 24 1.34% PYKS 24 1.34% H6H 22 1.23% F3'5'H/CYP75A 20 1.12% SMT1/SMT2/SMT3 20 1.12% CHS 18 1.01% TRI/TRII 16 0.89% CAD 16 0.89% NCS 15 0.84% CSE 15 0.84% CAS 15 0.84% CYP71 15 0.84% T16H 13 0.73% LAMT 13 0.73% HCT 13 0.73% RAS 13 0.73% SLS 12 0.67% G8O/G8H 12 0.67% COMT 12 0.67% CYP80B1 9 0.5% BBE 9 0.5% COR 9 0.5% CYP90D1 9 0.5% SGD 8 0.45% 8HGO 8 0.45% LAC 8 0.45% F5H/CYP84A 8 0.45% BR6OX1/CYP85A1 8 0.45% PMT 7 0.39% CCR 7 0.39% CPR 7 0.39% MPO 6 0.34% TDC 6 0.34% 7DLH 6 0.34% 16OMT 6 0.34% ANR 6 0.34% SQS/FDFT1 6 0.34% CPD/CYP90A1 6 0.34% ROT3/CYP90C1 6 0.34% CNMT 5 0.28% FNS 5 0.28% MVK 5 0.28% GGPPS 5 0.28% AACT 5 0.28% TYDC_DDC 4 0.22% CHI 4 0.22% TAT 4 0.22% DET2 4 0.22% FPPS 4 0.22% CYP719 3 0.17% ADC 3 0.17% FLS 3 0.17% ANS/LDOX 3 0.17% DFR 3 0.17% DWF5 3 0.17% SQE 3 0.17% TPS 3 0.17% MVD 3 0.17% HDR/IspH 3 0.17% GES 2 0.11% 6OMT_4OMT_SOMT 2 0.11% CCoAOMT 2 0.11% SMO1/SMO2 2 0.11% HYD1 2 0.11% DXS 2 0.11% PMK 2 0.11% HDS/IspG 2 0.11% MCT/IspD 2 0.11% DXR 2 0.11% ISY 1 0.06% HPPR 1 0.06% CPI1 1 0.06% DWF7 1 0.06% DWF1 1 0.06% FK 1 0.06% CYP51G1 1 0.06% HMGS 1 0.06% IDI 1 0.06% HMGR 1 0.06% CMK/IspE 1 0.06% MDS/IspF 1 0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 185 11 POD (96) View species results
Terpenoid pathway 173 19 BAHD (63) View species results
Alkaloid pathway 146 18 NMT (36) View species results
Flavonoid pathway 93 11 UFGT (33) View species results
Rosmarinic acid pathway 74 7 C4H (31) View species results
Steroid pathway 37 13 CAS (13) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 702 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 119 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAD
Reset
Gene Pathway Family Confidence Status Best Target
Bnov3100041010 Phenylpropanoid CAD medium pass CAD__00009__sp_P42734_CADH9_ARATH
Bnov74370061600 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Bnov753630062740 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Bnov787240066110 Phenylpropanoid CAD low borderline CAD__00015__sp_Q6ZHS4_CADH2_ORYSJ
Bnov841600100350 Phenylpropanoid CAD low borderline CAD__00008__sp_O49482_CADH5_ARATH
Bnov842690103910 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Bnov842800104350 Phenylpropanoid CAD low borderline CAD__00004__sp_B5LAT8_CAD1_CAPAN
Bnov849430132930 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Bnov850300137750 Phenylpropanoid CAD low borderline CAD__00008__sp_O49482_CADH5_ARATH
Bnov850600139520 Phenylpropanoid CAD low borderline CAD__00004__sp_B5LAT8_CAD1_CAPAN
Bnov851920146560 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
Bnov852190148330 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Bnov852190148340 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Bnov852320149140 Phenylpropanoid CAD low borderline CAD__00015__sp_Q6ZHS4_CADH2_ORYSJ
Bnov857730196920 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Bnov860340222500 Phenylpropanoid CAD low borderline CAD__00007__sp_O24562_CADH_MAIZE