PlantSME Plant secondary metabolism enzyme database

Bryhnia novae-angliae (bryhnia_novae_angliae)

Imported from atlas release summary for Bryhnia novae-angliae.

708
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Phenylpropanoid pathway 26.13% Terpenoid pathway 24.44% Alkaloid pathway 20.62% Flavonoid pathway 13.14% Rosmarinic acid pathway 10.45% Steroid pathway 5.23%
Family Distribution
C4H 6.82% C3'H/CYP98A 5.93% POD 5.54% BAHD 5.2% CYP76 4.64% 4CL 4.53% NMT 4.19% DWF4/CYP90B1 3.02%
Other Families 60.12%
More Families (94)
IFS 53 2.96% F3H 48 2.68% T3O 45 2.52% BR6OX2/CYP85A2 41 2.29% F3'H/CYP75B 40 2.24% UGT 40 2.24% IFR 38 2.13% 7DLGT 37 2.07% UFGT 37 2.07% PAL 36 2.01% STR 35 1.96% GS 35 1.96% IO 30 1.68% CODM/T6ODM 24 1.34% PYKS 24 1.34% H6H 22 1.23% F3'5'H/CYP75A 20 1.12% SMT1/SMT2/SMT3 20 1.12% CHS 18 1.01% TRI/TRII 16 0.89% CAD 16 0.89% NCS 15 0.84% CSE 15 0.84% CAS 15 0.84% CYP71 15 0.84% T16H 13 0.73% LAMT 13 0.73% HCT 13 0.73% RAS 13 0.73% SLS 12 0.67% G8O/G8H 12 0.67% COMT 12 0.67% CYP80B1 9 0.5% BBE 9 0.5% COR 9 0.5% CYP90D1 9 0.5% SGD 8 0.45% 8HGO 8 0.45% LAC 8 0.45% F5H/CYP84A 8 0.45% BR6OX1/CYP85A1 8 0.45% PMT 7 0.39% CCR 7 0.39% CPR 7 0.39% MPO 6 0.34% TDC 6 0.34% 7DLH 6 0.34% 16OMT 6 0.34% ANR 6 0.34% SQS/FDFT1 6 0.34% CPD/CYP90A1 6 0.34% ROT3/CYP90C1 6 0.34% CNMT 5 0.28% FNS 5 0.28% MVK 5 0.28% GGPPS 5 0.28% AACT 5 0.28% TYDC_DDC 4 0.22% CHI 4 0.22% TAT 4 0.22% DET2 4 0.22% FPPS 4 0.22% CYP719 3 0.17% ADC 3 0.17% FLS 3 0.17% ANS/LDOX 3 0.17% DFR 3 0.17% DWF5 3 0.17% SQE 3 0.17% TPS 3 0.17% MVD 3 0.17% HDR/IspH 3 0.17% GES 2 0.11% 6OMT_4OMT_SOMT 2 0.11% CCoAOMT 2 0.11% SMO1/SMO2 2 0.11% HYD1 2 0.11% DXS 2 0.11% PMK 2 0.11% HDS/IspG 2 0.11% MCT/IspD 2 0.11% DXR 2 0.11% ISY 1 0.06% HPPR 1 0.06% CPI1 1 0.06% DWF7 1 0.06% DWF1 1 0.06% FK 1 0.06% CYP51G1 1 0.06% HMGS 1 0.06% IDI 1 0.06% HMGR 1 0.06% CMK/IspE 1 0.06% MDS/IspF 1 0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 185 11 POD (96) View species results
Terpenoid pathway 173 19 BAHD (63) View species results
Alkaloid pathway 146 18 NMT (36) View species results
Flavonoid pathway 93 11 UFGT (33) View species results
Rosmarinic acid pathway 74 7 C4H (31) View species results
Steroid pathway 37 13 CAS (13) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 702 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 119 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SLS
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Gene Pathway Family Confidence Status Best Target
Bnov1970017990 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Bnov470052020 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Bnov806500071020 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Bnov811070072390 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Bnov812000073010 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Bnov833050084880 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Bnov835060088030 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Bnov840010096260 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Bnov843310105970 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Bnov844490110320 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Bnov849070131070 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Bnov855160173680 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO