PlantSME Plant secondary metabolism enzyme database

Bryhnia novae-angliae (bryhnia_novae_angliae)

Imported from atlas release summary for Bryhnia novae-angliae.

708
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Phenylpropanoid pathway 26.13% Terpenoid pathway 24.44% Alkaloid pathway 20.62% Flavonoid pathway 13.14% Rosmarinic acid pathway 10.45% Steroid pathway 5.23%
Family Distribution
C4H 6.82% C3'H/CYP98A 5.93% POD 5.54% BAHD 5.2% CYP76 4.64% 4CL 4.53% NMT 4.19% DWF4/CYP90B1 3.02%
Other Families 60.12%
More Families (94)
IFS 53 2.96% F3H 48 2.68% T3O 45 2.52% BR6OX2/CYP85A2 41 2.29% F3'H/CYP75B 40 2.24% UGT 40 2.24% IFR 38 2.13% 7DLGT 37 2.07% UFGT 37 2.07% PAL 36 2.01% STR 35 1.96% GS 35 1.96% IO 30 1.68% CODM/T6ODM 24 1.34% PYKS 24 1.34% H6H 22 1.23% F3'5'H/CYP75A 20 1.12% SMT1/SMT2/SMT3 20 1.12% CHS 18 1.01% TRI/TRII 16 0.89% CAD 16 0.89% NCS 15 0.84% CSE 15 0.84% CAS 15 0.84% CYP71 15 0.84% T16H 13 0.73% LAMT 13 0.73% HCT 13 0.73% RAS 13 0.73% SLS 12 0.67% G8O/G8H 12 0.67% COMT 12 0.67% CYP80B1 9 0.5% BBE 9 0.5% COR 9 0.5% CYP90D1 9 0.5% SGD 8 0.45% 8HGO 8 0.45% LAC 8 0.45% F5H/CYP84A 8 0.45% BR6OX1/CYP85A1 8 0.45% PMT 7 0.39% CCR 7 0.39% CPR 7 0.39% MPO 6 0.34% TDC 6 0.34% 7DLH 6 0.34% 16OMT 6 0.34% ANR 6 0.34% SQS/FDFT1 6 0.34% CPD/CYP90A1 6 0.34% ROT3/CYP90C1 6 0.34% CNMT 5 0.28% FNS 5 0.28% MVK 5 0.28% GGPPS 5 0.28% AACT 5 0.28% TYDC_DDC 4 0.22% CHI 4 0.22% TAT 4 0.22% DET2 4 0.22% FPPS 4 0.22% CYP719 3 0.17% ADC 3 0.17% FLS 3 0.17% ANS/LDOX 3 0.17% DFR 3 0.17% DWF5 3 0.17% SQE 3 0.17% TPS 3 0.17% MVD 3 0.17% HDR/IspH 3 0.17% GES 2 0.11% 6OMT_4OMT_SOMT 2 0.11% CCoAOMT 2 0.11% SMO1/SMO2 2 0.11% HYD1 2 0.11% DXS 2 0.11% PMK 2 0.11% HDS/IspG 2 0.11% MCT/IspD 2 0.11% DXR 2 0.11% ISY 1 0.06% HPPR 1 0.06% CPI1 1 0.06% DWF7 1 0.06% DWF1 1 0.06% FK 1 0.06% CYP51G1 1 0.06% HMGS 1 0.06% IDI 1 0.06% HMGR 1 0.06% CMK/IspE 1 0.06% MDS/IspF 1 0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 185 11 POD (96) View species results
Terpenoid pathway 173 19 BAHD (63) View species results
Alkaloid pathway 146 18 NMT (36) View species results
Flavonoid pathway 93 11 UFGT (33) View species results
Rosmarinic acid pathway 74 7 C4H (31) View species results
Steroid pathway 37 13 CAS (13) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 702 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 119 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
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Gene Pathway Family Confidence Status
Bnov1330006040 Alkaloid PYKS low borderline
Bnov1820015700 Alkaloid PYKS high pass
Bnov2110019140 Alkaloid PYKS medium pass
Bnov2110019150 Alkaloid PYKS high pass
Bnov2220021980 Alkaloid PYKS low borderline
Bnov3090039910 Alkaloid PYKS low borderline
Bnov833080084960 Alkaloid PYKS medium pass
Bnov840890098620 Alkaloid PYKS low borderline
Bnov845760116230 Alkaloid PYKS medium pass
Bnov849880134950 Alkaloid PYKS low borderline
Bnov851770145470 Alkaloid PYKS low borderline
Bnov853160157290 Alkaloid PYKS low borderline
Bnov853700161600 Alkaloid PYKS low borderline
Bnov858000199450 Alkaloid PYKS high pass
Bnov858360203160 Alkaloid PYKS high pass
Bnov859490214290 Alkaloid PYKS low borderline
Bnov860360222570 Alkaloid PYKS high pass
Bnov861190230130 Alkaloid PYKS high pass
Bnov861840237350 Alkaloid PYKS low borderline
Bnov862170239610 Alkaloid PYKS medium pass
Bnov954530246360 Alkaloid PYKS high pass
Bnov954540246370 Alkaloid PYKS high pass
Bnov997160248280 Alkaloid PYKS high pass
Bnov997180248360 Alkaloid PYKS high pass