PlantSME Plant secondary metabolism enzyme database

Casuarina glauca (casuarina_glauca)

Imported from atlas release summary for Casuarina glauca.

1516
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 28.76% Alkaloid pathway 21.44% Phenylpropanoid pathway 20.05% Flavonoid pathway 14.45% Rosmarinic acid pathway 7.65% Steroid pathway 7.65%
Family Distribution
C4H 5.92% C3'H/CYP98A 5.85% BAHD 5.48% UGT 5.26% 7DLGT 4.32% POD 3.83% UFGT 3.73% CYP76 3.63%
Other Families 61.99%
More Families (97)
IFS 134 3.31% T3O 123 3.04% 4CL 111 2.74% DWF4/CYP90B1 106 2.62% F3'H/CYP75B 97 2.39% F3H 92 2.27% CAD 80 1.97% BR6OX2/CYP85A2 69 1.7% CAS 69 1.7% NMT 64 1.58% CODM/T6ODM 63 1.55% TRI/TRII 58 1.43% SMT1/SMT2/SMT3 57 1.41% HCT 51 1.26% TAT 51 1.26% STR 50 1.23% IFR 46 1.14% G8O/G8H 45 1.11% H6H 45 1.11% T16H 42 1.04% TPS 42 1.04% LAC 41 1.01% GS 40 0.99% GES 38 0.94% CYP71 38 0.94% F5H/CYP84A 36 0.89% COMT 36 0.89% CYP90D1 36 0.89% CSE 33 0.81% IO 32 0.79% PAL 32 0.79% 7DLH 28 0.69% FNS 27 0.67% CPD/CYP90A1 27 0.67% F3'5'H/CYP75A 26 0.64% PYKS 25 0.62% SGD 25 0.62% CCR 25 0.62% PMT 24 0.59% ANR 24 0.59% RAS 24 0.59% 16OMT 23 0.57% SQE 23 0.57% SLS 20 0.49% NCS 19 0.47% DFR 19 0.47% BR6OX1/CYP85A1 18 0.44% 8HGO 17 0.42% COR 16 0.39% ROT3/CYP90C1 15 0.37% CYP80B1 13 0.32% LAMT 13 0.32% BBE 13 0.32% CNMT 11 0.27% CCoAOMT 11 0.27% 6OMT_4OMT_SOMT 10 0.25% ANS/LDOX 10 0.25% TYDC_DDC 9 0.22% ISY 9 0.22% CYP51G1 9 0.22% FPPS 9 0.22% CHS 7 0.17% AACT 7 0.17% MPO 6 0.15% CPR 6 0.15% GGPPS 6 0.15% TDC 5 0.12% HPPR 5 0.12% DET2 5 0.12% DXS 5 0.12% CYP719 4 0.1% SQS/FDFT1 4 0.1% MVK 4 0.1% PMK 4 0.1% ADC 3 0.07% FLS 3 0.07% CHI 3 0.07% SMO1/SMO2 3 0.07% MDS/IspF 3 0.07% HMGR 3 0.07% MVD 3 0.07% HDS/IspG 3 0.07% XMT_MXMT_DXMT 2 0.05% DWF7 2 0.05% HYD1 2 0.05% DWF1 2 0.05% CMK/IspE 2 0.05% MCT/IspD 2 0.05% ODC 1 0.02% CPI1 1 0.02% FK 1 0.02% DWF5 1 0.02% HMGS 1 0.02% IDI 1 0.02% DXR 1 0.02% HDR/IspH 1 0.02% GPPS 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 436 19 BAHD (167) View species results
Alkaloid pathway 325 24 7DLGT (68) View species results
Phenylpropanoid pathway 304 11 POD (121) View species results
Flavonoid pathway 219 12 UFGT (133) View species results
Rosmarinic acid pathway 116 7 C4H (36) View species results
Steroid pathway 116 11 CAS (55) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1542 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 297 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 8HGO
Reset
Gene Pathway Family Confidence Status
Cglascaffold1010003910 Alkaloid 8HGO medium pass
Cglascaffold1010003980 Alkaloid 8HGO medium borderline
Cglascaffold1520046440 Alkaloid 8HGO medium borderline
Cglascaffold1820066670 Alkaloid 8HGO medium borderline
Cglascaffold2340087750 Alkaloid 8HGO medium borderline
Cglascaffold2360088790 Alkaloid 8HGO low borderline
Cglascaffold2360089390 Alkaloid 8HGO medium borderline
Cglascaffold2670106560 Alkaloid 8HGO medium borderline
Cglascaffold26860108200 Alkaloid 8HGO medium pass
Cglascaffold3060128060 Alkaloid 8HGO medium borderline
Cglascaffold40164400 Alkaloid 8HGO medium borderline
Cglascaffold40164410 Alkaloid 8HGO medium borderline
Cglascaffold640211190 Alkaloid 8HGO medium borderline
Cglascaffold640211210 Alkaloid 8HGO medium pass
Cglascaffold640211220 Alkaloid 8HGO medium borderline
Cglascaffold670222320 Alkaloid 8HGO low borderline
Cglascaffold670222340 Alkaloid 8HGO medium pass