Casuarina glauca (casuarina_glauca)
Imported from atlas release summary for Casuarina glauca.
1516
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1516
Candidate Genes
C4H
5.92%
C3'H/CYP98A
5.85%
BAHD
5.48%
UGT
5.26%
7DLGT
4.32%
POD
3.83%
UFGT
3.73%
CYP76
3.63%
Other Families
61.99%
More Families (97)
IFS
134
3.31%
T3O
123
3.04%
4CL
111
2.74%
DWF4/CYP90B1
106
2.62%
F3'H/CYP75B
97
2.39%
F3H
92
2.27%
CAD
80
1.97%
BR6OX2/CYP85A2
69
1.7%
CAS
69
1.7%
NMT
64
1.58%
CODM/T6ODM
63
1.55%
TRI/TRII
58
1.43%
SMT1/SMT2/SMT3
57
1.41%
HCT
51
1.26%
TAT
51
1.26%
STR
50
1.23%
IFR
46
1.14%
G8O/G8H
45
1.11%
H6H
45
1.11%
T16H
42
1.04%
TPS
42
1.04%
LAC
41
1.01%
GS
40
0.99%
GES
38
0.94%
CYP71
38
0.94%
F5H/CYP84A
36
0.89%
COMT
36
0.89%
CYP90D1
36
0.89%
CSE
33
0.81%
IO
32
0.79%
PAL
32
0.79%
7DLH
28
0.69%
FNS
27
0.67%
CPD/CYP90A1
27
0.67%
F3'5'H/CYP75A
26
0.64%
PYKS
25
0.62%
SGD
25
0.62%
CCR
25
0.62%
PMT
24
0.59%
ANR
24
0.59%
RAS
24
0.59%
16OMT
23
0.57%
SQE
23
0.57%
SLS
20
0.49%
NCS
19
0.47%
DFR
19
0.47%
BR6OX1/CYP85A1
18
0.44%
8HGO
17
0.42%
COR
16
0.39%
ROT3/CYP90C1
15
0.37%
CYP80B1
13
0.32%
LAMT
13
0.32%
BBE
13
0.32%
CNMT
11
0.27%
CCoAOMT
11
0.27%
6OMT_4OMT_SOMT
10
0.25%
ANS/LDOX
10
0.25%
TYDC_DDC
9
0.22%
ISY
9
0.22%
CYP51G1
9
0.22%
FPPS
9
0.22%
CHS
7
0.17%
AACT
7
0.17%
MPO
6
0.15%
CPR
6
0.15%
GGPPS
6
0.15%
TDC
5
0.12%
HPPR
5
0.12%
DET2
5
0.12%
DXS
5
0.12%
CYP719
4
0.1%
SQS/FDFT1
4
0.1%
MVK
4
0.1%
PMK
4
0.1%
ADC
3
0.07%
FLS
3
0.07%
CHI
3
0.07%
SMO1/SMO2
3
0.07%
MDS/IspF
3
0.07%
HMGR
3
0.07%
MVD
3
0.07%
HDS/IspG
3
0.07%
XMT_MXMT_DXMT
2
0.05%
DWF7
2
0.05%
HYD1
2
0.05%
DWF1
2
0.05%
CMK/IspE
2
0.05%
MCT/IspD
2
0.05%
ODC
1
0.02%
CPI1
1
0.02%
FK
1
0.02%
DWF5
1
0.02%
HMGS
1
0.02%
IDI
1
0.02%
DXR
1
0.02%
HDR/IspH
1
0.02%
GPPS
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 436 | 19 | BAHD (167) | View species results |
| Alkaloid pathway | 325 | 24 | 7DLGT (68) | View species results |
| Phenylpropanoid pathway | 304 | 11 | POD (121) | View species results |
| Flavonoid pathway | 219 | 12 | UFGT (133) | View species results |
| Rosmarinic acid pathway | 116 | 7 | C4H (36) | View species results |
| Steroid pathway | 116 | 11 | CAS (55) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1542 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 297 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Cglascaffold10650008870 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold1140013430 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold1190017700 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold1190017710 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold1350032130 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold1350032140 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold150044000 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold150045010 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold1950070010 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold210076050 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold230083810 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold230083860 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold2360089200 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold2410092410 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold250097020 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold2590099760 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold260100370 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Cglascaffold260100840 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold260101370 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold2910117900 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold3060128110 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold310132330 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold310132340 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold310132370 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold310136050 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold310137030 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold320141470 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold320141480 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold3280144410 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Cglascaffold3280144420 | Alkaloid | STR | low | borderline | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Cglascaffold340148880 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold3690158050 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold3880160080 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold400165440 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Cglascaffold400165460 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Cglascaffold430172740 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold430172760 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold440176440 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold480188340 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold5000194150 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold5550203100 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold640216010 | Alkaloid | STR | medium | pass | STR__00002__sp_P68175_STSY_RAUSE |
| Cglascaffold640216340 | Alkaloid | STR | low | borderline | STR__00002__sp_P68175_STSY_RAUSE |
| Cglascaffold650218510 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold660219690 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold670220830 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Cglascaffold80238880 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold80238960 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cglascaffold80239720 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Cglascaffold850245720 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |