PlantSME Plant secondary metabolism enzyme database

Casuarina glauca (casuarina_glauca)

Imported from atlas release summary for Casuarina glauca.

1516
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 28.76% Alkaloid pathway 21.44% Phenylpropanoid pathway 20.05% Flavonoid pathway 14.45% Rosmarinic acid pathway 7.65% Steroid pathway 7.65%
Family Distribution
C4H 5.92% C3'H/CYP98A 5.85% BAHD 5.48% UGT 5.26% 7DLGT 4.32% POD 3.83% UFGT 3.73% CYP76 3.63%
Other Families 61.99%
More Families (97)
IFS 134 3.31% T3O 123 3.04% 4CL 111 2.74% DWF4/CYP90B1 106 2.62% F3'H/CYP75B 97 2.39% F3H 92 2.27% CAD 80 1.97% BR6OX2/CYP85A2 69 1.7% CAS 69 1.7% NMT 64 1.58% CODM/T6ODM 63 1.55% TRI/TRII 58 1.43% SMT1/SMT2/SMT3 57 1.41% HCT 51 1.26% TAT 51 1.26% STR 50 1.23% IFR 46 1.14% G8O/G8H 45 1.11% H6H 45 1.11% T16H 42 1.04% TPS 42 1.04% LAC 41 1.01% GS 40 0.99% GES 38 0.94% CYP71 38 0.94% F5H/CYP84A 36 0.89% COMT 36 0.89% CYP90D1 36 0.89% CSE 33 0.81% IO 32 0.79% PAL 32 0.79% 7DLH 28 0.69% FNS 27 0.67% CPD/CYP90A1 27 0.67% F3'5'H/CYP75A 26 0.64% PYKS 25 0.62% SGD 25 0.62% CCR 25 0.62% PMT 24 0.59% ANR 24 0.59% RAS 24 0.59% 16OMT 23 0.57% SQE 23 0.57% SLS 20 0.49% NCS 19 0.47% DFR 19 0.47% BR6OX1/CYP85A1 18 0.44% 8HGO 17 0.42% COR 16 0.39% ROT3/CYP90C1 15 0.37% CYP80B1 13 0.32% LAMT 13 0.32% BBE 13 0.32% CNMT 11 0.27% CCoAOMT 11 0.27% 6OMT_4OMT_SOMT 10 0.25% ANS/LDOX 10 0.25% TYDC_DDC 9 0.22% ISY 9 0.22% CYP51G1 9 0.22% FPPS 9 0.22% CHS 7 0.17% AACT 7 0.17% MPO 6 0.15% CPR 6 0.15% GGPPS 6 0.15% TDC 5 0.12% HPPR 5 0.12% DET2 5 0.12% DXS 5 0.12% CYP719 4 0.1% SQS/FDFT1 4 0.1% MVK 4 0.1% PMK 4 0.1% ADC 3 0.07% FLS 3 0.07% CHI 3 0.07% SMO1/SMO2 3 0.07% MDS/IspF 3 0.07% HMGR 3 0.07% MVD 3 0.07% HDS/IspG 3 0.07% XMT_MXMT_DXMT 2 0.05% DWF7 2 0.05% HYD1 2 0.05% DWF1 2 0.05% CMK/IspE 2 0.05% MCT/IspD 2 0.05% ODC 1 0.02% CPI1 1 0.02% FK 1 0.02% DWF5 1 0.02% HMGS 1 0.02% IDI 1 0.02% DXR 1 0.02% HDR/IspH 1 0.02% GPPS 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 436 19 BAHD (167) View species results
Alkaloid pathway 325 24 7DLGT (68) View species results
Phenylpropanoid pathway 304 11 POD (121) View species results
Flavonoid pathway 219 12 UFGT (133) View species results
Rosmarinic acid pathway 116 7 C4H (36) View species results
Steroid pathway 116 11 CAS (55) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1542 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 297 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: COR
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Gene Pathway Family Confidence Status Best Target
Cglascaffold1010003500 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Cglascaffold1440038260 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Cglascaffold1440038270 Alkaloid COR low borderline COR__00002__sp_Q9SQ67_COR14_PAPSO
Cglascaffold1440038280 Alkaloid COR medium pass COR__00005__sp_Q9SQ70_COR11_PAPSO
Cglascaffold160050950 Alkaloid COR medium pass COR__00004__sp_Q9SQ69_COR12_PAPSO
Cglascaffold160050970 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Cglascaffold1690057240 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Cglascaffold2600102430 Alkaloid COR low borderline COR__00004__sp_Q9SQ69_COR12_PAPSO
Cglascaffold3300146630 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Cglascaffold3660157290 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Cglascaffold3660157360 Alkaloid COR medium pass COR__00004__sp_Q9SQ69_COR12_PAPSO
Cglascaffold520197240 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Cglascaffold520197250 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Cglascaffold530198730 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Cglascaffold6170209060 Alkaloid COR medium pass COR__00001__sp_B9VRJ2_COR15_PAPSO
Cglascaffold670221250 Alkaloid COR medium pass COR__00004__sp_Q9SQ69_COR12_PAPSO