Cercis canadensis (cercis_canadensis)
Imported from atlas release summary for Cercis canadensis.
1528
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1528
Candidate Genes
C4H
5.97%
C3'H/CYP98A
5.41%
BAHD
4.53%
CYP76
4.22%
UGT
3.8%
IFS
3.31%
7DLGT
3.24%
F3H
3.24%
Other Families
66.28%
More Families (95)
UFGT
133
3.24%
POD
118
2.88%
T3O
110
2.68%
DWF4/CYP90B1
98
2.39%
4CL
96
2.34%
NMT
95
2.31%
COMT
90
2.19%
CODM/T6ODM
89
2.17%
F3'H/CYP75B
79
1.92%
CAD
75
1.83%
TPS
69
1.68%
CAS
68
1.66%
BR6OX2/CYP85A2
67
1.63%
H6H
64
1.56%
STR
61
1.49%
GES
56
1.36%
F5H/CYP84A
51
1.24%
FNS
46
1.12%
G8O/G8H
45
1.1%
SMT1/SMT2/SMT3
45
1.1%
T16H
44
1.07%
16OMT
44
1.07%
LAC
44
1.07%
HCT
43
1.05%
CYP71
43
1.05%
CSE
42
1.02%
GS
41
1.0%
PYKS
41
1.0%
TRI/TRII
41
1.0%
CYP90D1
39
0.95%
IO
38
0.93%
BBE
34
0.83%
SGD
34
0.83%
RAS
34
0.83%
7DLH
29
0.71%
ANS/LDOX
29
0.71%
IFR
28
0.68%
NCS
27
0.66%
COR
26
0.63%
CHS
26
0.63%
F3'5'H/CYP75A
25
0.61%
BR6OX1/CYP85A1
24
0.58%
CYP51G1
21
0.51%
TAT
20
0.49%
SLS
18
0.44%
8HGO
18
0.44%
PMT
18
0.44%
ANR
18
0.44%
CCR
16
0.39%
LAMT
15
0.37%
CHI
13
0.32%
HPPR
13
0.32%
PAL
12
0.29%
CCoAOMT
12
0.29%
ROT3/CYP90C1
12
0.29%
CPD/CYP90A1
12
0.29%
TYDC_DDC
10
0.24%
MPO
9
0.22%
CNMT
9
0.22%
DFR
9
0.22%
SQS/FDFT1
9
0.22%
AACT
9
0.22%
ISY
8
0.19%
CPR
8
0.19%
DXS
8
0.19%
CYP719
7
0.17%
CYP80B1
7
0.17%
6OMT_4OMT_SOMT
6
0.15%
SQE
6
0.15%
GGPPS
6
0.15%
DET2
5
0.12%
MVK
5
0.12%
FPPS
5
0.12%
FLS
4
0.1%
SMO1/SMO2
4
0.1%
MVD
4
0.1%
HDS/IspG
3
0.07%
HMGS
3
0.07%
IDI
3
0.07%
XMT_MXMT_DXMT
2
0.05%
TDC
2
0.05%
HYD1
2
0.05%
DWF7
2
0.05%
FK
2
0.05%
MCT/IspD
2
0.05%
CMK/IspE
2
0.05%
HMGR
2
0.05%
ADC
1
0.02%
ODC
1
0.02%
CPI1
1
0.02%
DWF5
1
0.02%
DXR
1
0.02%
HDR/IspH
1
0.02%
MDS/IspF
1
0.02%
PMK
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 404 | 19 | BAHD (143) | View species results |
| Alkaloid pathway | 367 | 25 | 7DLGT (69) | View species results |
| Phenylpropanoid pathway | 343 | 12 | POD (103) | View species results |
| Flavonoid pathway | 211 | 12 | UFGT (123) | View species results |
| Rosmarinic acid pathway | 115 | 7 | C4H (43) | View species results |
| Steroid pathway | 88 | 10 | CAS (41) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1545 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 263 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFR
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Ccanascaffold1008|size401220000340 | Flavonoid | IFR | medium | pass |
| Ccanascaffold10|size20661020013170 | Flavonoid | IFR | low | borderline |
| Ccanascaffold119|size6801160022220 | Flavonoid | IFR | medium | pass |
| Ccanascaffold123|size5653440027050 | Flavonoid | IFR | low | borderline |
| Ccanascaffold12|size18880710033390 | Flavonoid | IFR | low | borderline |
| Ccanascaffold13|size21673360042380 | Flavonoid | IFR | medium | pass |
| Ccanascaffold14|size17177730051990 | Flavonoid | IFR | low | borderline |
| Ccanascaffold170|size7156520069870 | Flavonoid | IFR | low | borderline |
| Ccanascaffold240|size3319750119760 | Flavonoid | IFR | low | borderline |
| Ccanascaffold24|size12864290123670 | Flavonoid | IFR | low | borderline |
| Ccanascaffold251|size3223740124680 | Flavonoid | IFR | low | borderline |
| Ccanascaffold29|size11377740148660 | Flavonoid | IFR | low | borderline |
| Ccanascaffold2|size26448170150200 | Flavonoid | IFR | low | borderline |
| Ccanascaffold2|size26448170151490 | Flavonoid | IFR | high | pass |
| Ccanascaffold319|size2949240161280 | Flavonoid | IFR | high | pass |
| Ccanascaffold35|size10478240180710 | Flavonoid | IFR | low | borderline |
| Ccanascaffold429|size2590780210000 | Flavonoid | IFR | low | borderline |
| Ccanascaffold45|size9152910219270 | Flavonoid | IFR | high | pass |
| Ccanascaffold48|size8924240228290 | Flavonoid | IFR | low | borderline |
| Ccanascaffold54|size8421370250110 | Flavonoid | IFR | low | borderline |
| Ccanascaffold61|size8088400268850 | Flavonoid | IFR | low | borderline |
| Ccanascaffold70|size7316650289290 | Flavonoid | IFR | low | borderline |
| Ccanascaffold89|size6651940319520 | Flavonoid | IFR | low | borderline |
| Ccanascaffold8|size19914830321780 | Flavonoid | IFR | low | borderline |
| Ccanascaffold90|size12695360323860 | Flavonoid | IFR | low | borderline |
| Ccanascaffold9|size31223100335780 | Flavonoid | IFR | medium | pass |
| Ccanascaffold9|size31223100339050 | Flavonoid | IFR | medium | pass |
| Ccanascaffold9|size31223100339420 | Flavonoid | IFR | low | borderline |