Cercis canadensis (cercis_canadensis)
Imported from atlas release summary for Cercis canadensis.
1528
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1528
Candidate Genes
C4H
5.97%
C3'H/CYP98A
5.41%
BAHD
4.53%
CYP76
4.22%
UGT
3.8%
IFS
3.31%
7DLGT
3.24%
F3H
3.24%
Other Families
66.28%
More Families (95)
UFGT
133
3.24%
POD
118
2.88%
T3O
110
2.68%
DWF4/CYP90B1
98
2.39%
4CL
96
2.34%
NMT
95
2.31%
COMT
90
2.19%
CODM/T6ODM
89
2.17%
F3'H/CYP75B
79
1.92%
CAD
75
1.83%
TPS
69
1.68%
CAS
68
1.66%
BR6OX2/CYP85A2
67
1.63%
H6H
64
1.56%
STR
61
1.49%
GES
56
1.36%
F5H/CYP84A
51
1.24%
FNS
46
1.12%
G8O/G8H
45
1.1%
SMT1/SMT2/SMT3
45
1.1%
T16H
44
1.07%
16OMT
44
1.07%
LAC
44
1.07%
HCT
43
1.05%
CYP71
43
1.05%
CSE
42
1.02%
GS
41
1.0%
PYKS
41
1.0%
TRI/TRII
41
1.0%
CYP90D1
39
0.95%
IO
38
0.93%
BBE
34
0.83%
SGD
34
0.83%
RAS
34
0.83%
7DLH
29
0.71%
ANS/LDOX
29
0.71%
IFR
28
0.68%
NCS
27
0.66%
COR
26
0.63%
CHS
26
0.63%
F3'5'H/CYP75A
25
0.61%
BR6OX1/CYP85A1
24
0.58%
CYP51G1
21
0.51%
TAT
20
0.49%
SLS
18
0.44%
8HGO
18
0.44%
PMT
18
0.44%
ANR
18
0.44%
CCR
16
0.39%
LAMT
15
0.37%
CHI
13
0.32%
HPPR
13
0.32%
PAL
12
0.29%
CCoAOMT
12
0.29%
ROT3/CYP90C1
12
0.29%
CPD/CYP90A1
12
0.29%
TYDC_DDC
10
0.24%
MPO
9
0.22%
CNMT
9
0.22%
DFR
9
0.22%
SQS/FDFT1
9
0.22%
AACT
9
0.22%
ISY
8
0.19%
CPR
8
0.19%
DXS
8
0.19%
CYP719
7
0.17%
CYP80B1
7
0.17%
6OMT_4OMT_SOMT
6
0.15%
SQE
6
0.15%
GGPPS
6
0.15%
DET2
5
0.12%
MVK
5
0.12%
FPPS
5
0.12%
FLS
4
0.1%
SMO1/SMO2
4
0.1%
MVD
4
0.1%
HDS/IspG
3
0.07%
HMGS
3
0.07%
IDI
3
0.07%
XMT_MXMT_DXMT
2
0.05%
TDC
2
0.05%
HYD1
2
0.05%
DWF7
2
0.05%
FK
2
0.05%
MCT/IspD
2
0.05%
CMK/IspE
2
0.05%
HMGR
2
0.05%
ADC
1
0.02%
ODC
1
0.02%
CPI1
1
0.02%
DWF5
1
0.02%
DXR
1
0.02%
HDR/IspH
1
0.02%
MDS/IspF
1
0.02%
PMK
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 404 | 19 | BAHD (143) | View species results |
| Alkaloid pathway | 367 | 25 | 7DLGT (69) | View species results |
| Phenylpropanoid pathway | 343 | 12 | POD (103) | View species results |
| Flavonoid pathway | 211 | 12 | UFGT (123) | View species results |
| Rosmarinic acid pathway | 115 | 7 | C4H (43) | View species results |
| Steroid pathway | 88 | 10 | CAS (41) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1545 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 263 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Ccanascaffold1037|size369140003840 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Ccanascaffold11|size18899830022720 | Alkaloid | NMT | medium | pass | NMT__00030__sp_Q43088_RBCMT_PEA |
| Ccanascaffold11|size18899830024030 | Alkaloid | NMT | medium | pass | NMT__00040__sp_Q84WW6_ASHH1_ARATH |
| Ccanascaffold11|size18899830024120 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Ccanascaffold12|size18880710032560 | Alkaloid | NMT | medium | pass | NMT__00069__sp_Q9ZSM8_EZA1_ARATH |
| Ccanascaffold134|size4871260037800 | Alkaloid | NMT | medium | borderline | NMT__00038__sp_Q84PP7_MXMT2_COFAR |
| Ccanascaffold1381|size250150040040 | Alkaloid | NMT | medium | pass | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Ccanascaffold1381|size250150040050 | Alkaloid | NMT | medium | pass | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Ccanascaffold1384|size182010040060 | Alkaloid | NMT | medium | pass | NMT__00036__sp_Q6K9X3_NAMT1_ORYSJ |
| Ccanascaffold147|size4674490049100 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| Ccanascaffold150|size4565700054210 | Alkaloid | NMT | medium | pass | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| Ccanascaffold1525|size221240055030 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Ccanascaffold166|size4294030065350 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Ccanascaffold16|size15806760068830 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Ccanascaffold1762|size115210073280 | Alkaloid | NMT | medium | pass | NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI |
| Ccanascaffold176|size4133610073360 | Alkaloid | NMT | medium | pass | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| Ccanascaffold177|size4189330074410 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Ccanascaffold182|size4080190079500 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Ccanascaffold193|size3933590087160 | Alkaloid | NMT | low | borderline | NMT__00034__sp_Q5VN06_CLF_ORYSJ |
| Ccanascaffold197|size3804570089030 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Ccanascaffold19|size14321540090920 | Alkaloid | NMT | low | borderline | NMT__00023__sp_O82210_ANM12_ARATH |
| Ccanascaffold208|size3597690098190 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Ccanascaffold20|size13947410100620 | Alkaloid | NMT | low | borderline | NMT__00024__sp_P0CB22_ATX2_ARATH |
| Ccanascaffold22|size25039140111460 | Alkaloid | NMT | medium | pass | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Ccanascaffold22|size25039140112730 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Ccanascaffold22|size25039140112750 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Ccanascaffold22|size25039140112780 | Alkaloid | NMT | medium | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| Ccanascaffold22|size25039140112830 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Ccanascaffold241|size3768880120040 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| Ccanascaffold241|size3768880120160 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Ccanascaffold26|size12088910132240 | Alkaloid | NMT | low | borderline | NMT__00024__sp_P0CB22_ATX2_ARATH |
| Ccanascaffold270|size4036220133950 | Alkaloid | NMT | medium | pass | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Ccanascaffold27|size12034660137920 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Ccanascaffold27|size12034660137930 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Ccanascaffold287|size3524480141690 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Ccanascaffold288|size2889940142130 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Ccanascaffold288|size2889940142240 | Alkaloid | NMT | medium | pass | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Ccanascaffold292|size2855570145250 | Alkaloid | NMT | medium | pass | NMT__00069__sp_Q9ZSM8_EZA1_ARATH |
| Ccanascaffold29|size11377740148010 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| Ccanascaffold2|size26448170149590 | Alkaloid | NMT | medium | pass | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| Ccanascaffold2|size26448170151400 | Alkaloid | NMT | medium | borderline | NMT__00038__sp_Q84PP7_MXMT2_COFAR |
| Ccanascaffold307|size2764860155030 | Alkaloid | NMT | low | borderline | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| Ccanascaffold328|size2597800165320 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Ccanascaffold358|size2457220179400 | Alkaloid | NMT | medium | pass | NMT__00024__sp_P0CB22_ATX2_ARATH |
| Ccanascaffold362|size2446500181460 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Ccanascaffold372|size5450570185320 | Alkaloid | NMT | medium | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| Ccanascaffold373|size2396960185730 | Alkaloid | NMT | medium | pass | NMT__00023__sp_O82210_ANM12_ARATH |
| Ccanascaffold376|size2510850186440 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Ccanascaffold37|size10432130187480 | Alkaloid | NMT | medium | pass | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| Ccanascaffold37|size10432130188270 | Alkaloid | NMT | low | borderline | NMT__00054__sp_Q9FF80_SUVH1_ARATH |