Cercis canadensis (cercis_canadensis)
Imported from atlas release summary for Cercis canadensis.
1932
Candidate Protein Records
1528
Pathway-Level Records
4104
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
4104
Family-Level Calls
C4H
5.97%
C3'H/CYP98A
5.41%
BAHD
4.53%
CYP76
4.22%
UGT
3.8%
IFS
3.31%
7DLGT
3.24%
F3H
3.24%
Other Families
66.28%
More Families (95)
UFGT
133
3.24%
POD
118
2.88%
T3O
110
2.68%
DWF4/CYP90B1
98
2.39%
4CL
96
2.34%
NMT
95
2.31%
COMT
90
2.19%
CODM/T6ODM
89
2.17%
F3'H/CYP75B
79
1.92%
CAD
75
1.83%
TPS
69
1.68%
CAS
68
1.66%
BR6OX2/CYP85A2
67
1.63%
H6H
64
1.56%
STR
61
1.49%
GES
56
1.36%
F5H/CYP84A
51
1.24%
FNS
46
1.12%
G8O/G8H
45
1.1%
SMT1/SMT2/SMT3
45
1.1%
T16H
44
1.07%
16OMT
44
1.07%
LAC
44
1.07%
HCT
43
1.05%
CYP71
43
1.05%
CSE
42
1.02%
GS
41
1.0%
PYKS
41
1.0%
TRI/TRII
41
1.0%
CYP90D1
39
0.95%
IO
38
0.93%
BBE
34
0.83%
SGD
34
0.83%
RAS
34
0.83%
7DLH
29
0.71%
ANS/LDOX
29
0.71%
IFR
28
0.68%
NCS
27
0.66%
COR
26
0.63%
CHS
26
0.63%
F3'5'H/CYP75A
25
0.61%
BR6OX1/CYP85A1
24
0.58%
CYP51G1
21
0.51%
TAT
20
0.49%
SLS
18
0.44%
8HGO
18
0.44%
PMT
18
0.44%
ANR
18
0.44%
CCR
16
0.39%
LAMT
15
0.37%
CHI
13
0.32%
HPPR
13
0.32%
PAL
12
0.29%
CCoAOMT
12
0.29%
ROT3/CYP90C1
12
0.29%
CPD/CYP90A1
12
0.29%
TYDC_DDC
10
0.24%
MPO
9
0.22%
CNMT
9
0.22%
DFR
9
0.22%
SQS/FDFT1
9
0.22%
AACT
9
0.22%
ISY
8
0.19%
CPR
8
0.19%
DXS
8
0.19%
CYP719
7
0.17%
CYP80B1
7
0.17%
6OMT_4OMT_SOMT
6
0.15%
SQE
6
0.15%
GGPPS
6
0.15%
DET2
5
0.12%
MVK
5
0.12%
FPPS
5
0.12%
FLS
4
0.1%
SMO1/SMO2
4
0.1%
MVD
4
0.1%
HDS/IspG
3
0.07%
HMGS
3
0.07%
IDI
3
0.07%
XMT_MXMT_DXMT
2
0.05%
TDC
2
0.05%
HYD1
2
0.05%
DWF7
2
0.05%
FK
2
0.05%
MCT/IspD
2
0.05%
CMK/IspE
2
0.05%
HMGR
2
0.05%
ADC
1
0.02%
ODC
1
0.02%
CPI1
1
0.02%
DWF5
1
0.02%
DXR
1
0.02%
HDR/IspH
1
0.02%
MDS/IspF
1
0.02%
PMK
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 404 | 19 | BAHD (143) | View species results |
| Alkaloid pathway | 367 | 25 | 7DLGT (69) | View species results |
| Phenylpropanoid pathway | 343 | 12 | POD (103) | View species results |
| Flavonoid pathway | 211 | 12 | UFGT (123) | View species results |
| Rosmarinic acid pathway | 115 | 7 | C4H (43) | View species results |
| Steroid pathway | 88 | 10 | CAS (41) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1545 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 263 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Ccanascaffold467|size1744310221600 | Alkaloid | PYKS | low | borderline |
| Ccanascaffold536|size1807200246360 | Alkaloid | PYKS | low | borderline |
| Ccanascaffold68|size7662750282490 | Alkaloid | PYKS | low | borderline |
| Ccanascaffold70|size7316650289280 | Alkaloid | PYKS | low | borderline |
| Ccanascaffold741|size810030294290 | Alkaloid | PYKS | high | pass |
| Ccanascaffold80|size7052260307050 | Alkaloid | PYKS | high | pass |
| Ccanascaffold81|size6886730307870 | Alkaloid | PYKS | high | pass |
| Ccanascaffold91|size6376130325380 | Alkaloid | PYKS | high | pass |
| Ccanascaffold940|size1249740328190 | Alkaloid | PYKS | low | borderline |
| Ccanascaffold952|size467070329570 | Alkaloid | PYKS | high | pass |
| Ccanascaffold975|size924620332400 | Alkaloid | PYKS | low | borderline |
| Ccanascaffold1044|size536340004710 | Alkaloid | SGD | medium | pass |
| Ccanascaffold109|size5646740010550 | Alkaloid | SGD | low | borderline |
| Ccanascaffold109|size5646740010560 | Alkaloid | SGD | medium | pass |
| Ccanascaffold109|size5646740010590 | Alkaloid | SGD | low | borderline |
| Ccanascaffold1160|size432470018910 | Alkaloid | SGD | low | borderline |
| Ccanascaffold11|size18899830023200 | Alkaloid | SGD | medium | pass |
| Ccanascaffold11|size18899830023260 | Alkaloid | SGD | low | borderline |
| Ccanascaffold11|size18899830023290 | Alkaloid | SGD | medium | pass |
| Ccanascaffold12|size18880710033460 | Alkaloid | SGD | medium | pass |
| Ccanascaffold135|size5960530038720 | Alkaloid | SGD | low | borderline |
| Ccanascaffold1593|size135530059840 | Alkaloid | SGD | medium | pass |
| Ccanascaffold180|size4433100078250 | Alkaloid | SGD | medium | pass |
| Ccanascaffold202|size3725160095990 | Alkaloid | SGD | medium | pass |
| Ccanascaffold208|size3597690098350 | Alkaloid | SGD | low | borderline |
| Ccanascaffold272|size3083480135020 | Alkaloid | SGD | medium | pass |
| Ccanascaffold274|size3126280135950 | Alkaloid | SGD | medium | pass |
| Ccanascaffold286|size2899470141440 | Alkaloid | SGD | low | borderline |
| Ccanascaffold291|size2878120144860 | Alkaloid | SGD | medium | pass |
| Ccanascaffold291|size2878120144880 | Alkaloid | SGD | low | borderline |
| Ccanascaffold30|size19251710156140 | Alkaloid | SGD | low | borderline |
| Ccanascaffold315|size2686520159830 | Alkaloid | SGD | medium | pass |
| Ccanascaffold315|size2686520159840 | Alkaloid | SGD | medium | pass |
| Ccanascaffold4|size34372070233630 | Alkaloid | SGD | medium | pass |
| Ccanascaffold4|size34372070234450 | Alkaloid | SGD | medium | pass |
| Ccanascaffold538|size1508090246510 | Alkaloid | SGD | low | borderline |
| Ccanascaffold5|size23866360263730 | Alkaloid | SGD | medium | pass |
| Ccanascaffold60|size7932960266140 | Alkaloid | SGD | medium | pass |
| Ccanascaffold60|size7932960266200 | Alkaloid | SGD | medium | pass |
| Ccanascaffold726|size986530291610 | Alkaloid | SGD | low | borderline |
| Ccanascaffold80|size7052260307000 | Alkaloid | SGD | medium | pass |
| Ccanascaffold827|size643330309080 | Alkaloid | SGD | medium | pass |
| Ccanascaffold90|size12695360323320 | Alkaloid | SGD | low | borderline |
| Ccanascaffold94|size6338760329410 | Alkaloid | SGD | low | borderline |
| Ccanascaffold99|size5998930335290 | Alkaloid | SGD | medium | pass |
| Ccanascaffold102|size5866710003200 | Alkaloid | SLS | medium | borderline |
| Ccanascaffold115|size5427570018740 | Alkaloid | SLS | medium | borderline |
| Ccanascaffold127|size5074450030400 | Alkaloid | SLS | medium | borderline |
| Ccanascaffold13|size21673360042080 | Alkaloid | SLS | medium | borderline |
| Ccanascaffold15|size16254070061030 | Alkaloid | SLS | medium | borderline |