Chara braunii (chara_braunii)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 28.78% Alkaloid pathway 24.46% Phenylpropanoid pathway 18.71% Steroid pathway 18.71% Rosmarinic acid pathway 5.76% Flavonoid pathway 3.6%

Family Distribution

139 Candidate Genes

BAHD 11.59% NMT 8.33% 4CL 5.49% POD 4.88% STR 3.86% C4H 3.86% IFR 3.66% C3'H/CYP98A 3.46%

Other Families 54.88%

More Families (79)

CYP76 15 3.05% CYP71 14 2.85% CAS 12 2.44% TRI/TRII 9 1.83% SMT1/SMT2/SMT3 9 1.83% IO 8 1.63% CNMT 8 1.63% F3'H/CYP75B 8 1.63% BR6OX2/CYP85A2 8 1.63% CPR 7 1.42% GS 6 1.22% PAL 6 1.22% CSE 6 1.22% CPD/CYP90A1 6 1.22% DWF4/CYP90B1 6 1.22% PYKS 5 1.02% CHI 5 1.02% IFS 5 1.02% MVK 5 1.02% LAMT 4 0.81% FNS 4 0.81% HCT 4 0.81% SQS/FDFT1 4 0.81% BR6OX1/CYP85A1 4 0.81% PMK 4 0.81% H6H 3 0.61% SGD 3 0.61% PMT 3 0.61% T16H 3 0.61% RAS 3 0.61% DET2 3 0.61% DWF7 3 0.61% IDI 3 0.61% GGPPS 3 0.61% MVD 3 0.61% FPPS 3 0.61% AACT 3 0.61% TDC 2 0.41% TYDC_DDC 2 0.41% 8HGO 2 0.41% SLS 2 0.41% ADC 2 0.41% CYP80F1 2 0.41% CYP719 2 0.41% T3O 2 0.41% MPO 2 0.41% F3H 2 0.41% F3'5'H/CYP75A 2 0.41% COMT 2 0.41% SQE 2 0.41% SMO1/SMO2 2 0.41% FK 2 0.41% CPI1 2 0.41% MCT/IspD 2 0.41% HDR/IspH 2 0.41% DXR 2 0.41% UGT 2 0.41% GES 1 0.2% 16OMT 1 0.2% G8O/G8H 1 0.2% CODM/T6ODM 1 0.2% COR 1 0.2% UFGT 1 0.2% DFR 1 0.2% ANR 1 0.2% F5H/CYP84A 1 0.2% CCR 1 0.2% CAD 1 0.2% CYP51G1 1 0.2% DWF5 1 0.2% CYP90D1 1 0.2% DWF1 1 0.2% HYD1 1 0.2% HDS/IspG 1 0.2% DXS 1 0.2% TPS 1 0.2% CMK/IspE 1 0.2% HMGR 1 0.2% MDS/IspF 1 0.2%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	40	15	BAHD (17)	View species results
Alkaloid pathway	34	12	STR (9)	View species results
Phenylpropanoid pathway	26	4	POD (17)	View species results
Steroid pathway	26	10	CAS (9)	View species results
Rosmarinic acid pathway	8	3	CPR (5)	View species results
Flavonoid pathway	5	3	IFR (2)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	21	127	BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, SLS, T16H, T3O
BAHD/acyltransferase	3	64	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: NMT

Gene	Pathway	Family	Confidence	Status	Best Target
GBG59297	Alkaloid	NMT	low	borderline	NMT__00042__sp_Q8GZB6_SUVH4_ARATH
GBG61491	Alkaloid	NMT	medium	borderline	NMT__00023__sp_O82210_ANM12_ARATH
GBG62003	Alkaloid	NMT	low	borderline	NMT__00048__sp_Q8W595_SUVR4_ARATH
GBG62004	Alkaloid	NMT	low	borderline	NMT__00048__sp_Q8W595_SUVR4_ARATH
GBG63004	Alkaloid	NMT	low	borderline	NMT__00048__sp_Q8W595_SUVR4_ARATH
GBG63215	Alkaloid	NMT	medium	borderline	NMT__00065__sp_Q9SEH7_PMT2_TOBAC
GBG64291	Alkaloid	NMT	low	borderline	NMT__00060__sp_Q9MAT5_ANM10_ARATH
GBG67652	Alkaloid	NMT	low	borderline	NMT__00068__sp_Q9XI84_RBCMT_ARATH
GBG68506	Alkaloid	NMT	low	borderline	NMT__00067__sp_Q9T0G7_SUVH9_ARATH
GBG68915	Alkaloid	NMT	low	borderline	NMT__00039__sp_Q84W92_ANM13_ARATH
GBG69066	Alkaloid	NMT	low	borderline	NMT__00023__sp_O82210_ANM12_ARATH
GBG69429	Alkaloid	NMT	low	borderline	NMT__00033__sp_Q5QD03_SUVH3_CHLRE
GBG70592	Alkaloid	NMT	low	borderline	NMT__00056__sp_Q9FNE9_ATXR6_ARATH
GBG70613	Alkaloid	NMT	low	borderline	NMT__00059__sp_Q9M571_PEAMT_SPIOL
GBG71172	Alkaloid	NMT	medium	pass	NMT__00034__sp_Q5VN06_CLF_ORYSJ
GBG71173	Alkaloid	NMT	low	borderline	NMT__00025__sp_P93831_CLF_ARATH
GBG71689	Alkaloid	NMT	medium	pass	NMT__00060__sp_Q9MAT5_ANM10_ARATH
GBG71707	Alkaloid	NMT	low	borderline	NMT__00035__sp_Q6K431_TRX1_ORYSJ
GBG71920	Alkaloid	NMT	medium	borderline	NMT__00050__sp_Q944H0_PEAM2_ARATH
GBG71922	Alkaloid	NMT	low	borderline	NMT__00047__sp_Q8VZJ1_ATXR5_ARATH
GBG73012	Alkaloid	NMT	low	borderline	NMT__00040__sp_Q84WW6_ASHH1_ARATH
GBG74471	Alkaloid	NMT	low	borderline	NMT__00017__sp_F4K1J4_ATXR7_ARATH
GBG74472	Alkaloid	NMT	medium	pass	NMT__00017__sp_F4K1J4_ATXR7_ARATH
GBG74473	Alkaloid	NMT	medium	pass	NMT__00017__sp_F4K1J4_ATXR7_ARATH
GBG74514	Alkaloid	NMT	low	borderline	NMT__00024__sp_P0CB22_ATX2_ARATH
GBG74520	Alkaloid	NMT	low	borderline	NMT__00035__sp_Q6K431_TRX1_ORYSJ
GBG74524	Alkaloid	NMT	low	borderline	NMT__00035__sp_Q6K431_TRX1_ORYSJ
GBG76491	Alkaloid	NMT	low	borderline	NMT__00021__sp_O64827_SUVR5_ARATH
GBG81820	Alkaloid	NMT	medium	borderline	NMT__00059__sp_Q9M571_PEAMT_SPIOL
GBG84797	Alkaloid	NMT	medium	borderline	NMT__00015__sp_C8YTM5_PEAM2_WHEAT
GBG86446	Alkaloid	NMT	low	borderline	NMT__00028__sp_Q2LAE1_ASHH2_ARATH
GBG86447	Alkaloid	NMT	low	borderline	NMT__00028__sp_Q2LAE1_ASHH2_ARATH
GBG88936	Alkaloid	NMT	low	borderline	NMT__00021__sp_O64827_SUVR5_ARATH
GBG89943	Alkaloid	NMT	low	borderline	NMT__00040__sp_Q84WW6_ASHH1_ARATH
GBG90501	Alkaloid	NMT	medium	pass	NMT__00041__sp_Q8GWT4_ANM15_ARATH
GBG90502	Alkaloid	NMT	medium	pass	NMT__00041__sp_Q8GWT4_ANM15_ARATH
GBG90503	Alkaloid	NMT	medium	pass	NMT__00041__sp_Q8GWT4_ANM15_ARATH
GBG91499	Alkaloid	NMT	low	borderline	NMT__00028__sp_Q2LAE1_ASHH2_ARATH
GBG92010	Alkaloid	NMT	low	borderline	NMT__00030__sp_Q43088_RBCMT_PEA
GBG92028	Alkaloid	NMT	low	borderline	NMT__00020__sp_O23372_ATXR3_ARATH
GBG92079	Alkaloid	NMT	low	borderline	NMT__00056__sp_Q9FNE9_ATXR6_ARATH