Chara braunii (chara_braunii)
Imported from atlas release summary for Chara braunii.
139
Candidate Genes
87
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
139
Candidate Genes
BAHD
11.59%
NMT
8.33%
4CL
5.49%
POD
4.88%
STR
3.86%
C4H
3.86%
IFR
3.66%
C3'H/CYP98A
3.46%
Other Families
54.88%
More Families (79)
CYP76
15
3.05%
CYP71
14
2.85%
CAS
12
2.44%
TRI/TRII
9
1.83%
SMT1/SMT2/SMT3
9
1.83%
IO
8
1.63%
CNMT
8
1.63%
F3'H/CYP75B
8
1.63%
BR6OX2/CYP85A2
8
1.63%
CPR
7
1.42%
GS
6
1.22%
PAL
6
1.22%
CSE
6
1.22%
CPD/CYP90A1
6
1.22%
DWF4/CYP90B1
6
1.22%
PYKS
5
1.02%
CHI
5
1.02%
IFS
5
1.02%
MVK
5
1.02%
LAMT
4
0.81%
FNS
4
0.81%
HCT
4
0.81%
SQS/FDFT1
4
0.81%
BR6OX1/CYP85A1
4
0.81%
PMK
4
0.81%
H6H
3
0.61%
SGD
3
0.61%
PMT
3
0.61%
T16H
3
0.61%
RAS
3
0.61%
DET2
3
0.61%
DWF7
3
0.61%
IDI
3
0.61%
GGPPS
3
0.61%
MVD
3
0.61%
FPPS
3
0.61%
AACT
3
0.61%
TDC
2
0.41%
TYDC_DDC
2
0.41%
8HGO
2
0.41%
SLS
2
0.41%
ADC
2
0.41%
CYP80F1
2
0.41%
CYP719
2
0.41%
T3O
2
0.41%
MPO
2
0.41%
F3H
2
0.41%
F3'5'H/CYP75A
2
0.41%
COMT
2
0.41%
SQE
2
0.41%
SMO1/SMO2
2
0.41%
FK
2
0.41%
CPI1
2
0.41%
MCT/IspD
2
0.41%
HDR/IspH
2
0.41%
DXR
2
0.41%
UGT
2
0.41%
GES
1
0.2%
16OMT
1
0.2%
G8O/G8H
1
0.2%
CODM/T6ODM
1
0.2%
COR
1
0.2%
UFGT
1
0.2%
DFR
1
0.2%
ANR
1
0.2%
F5H/CYP84A
1
0.2%
CCR
1
0.2%
CAD
1
0.2%
CYP51G1
1
0.2%
DWF5
1
0.2%
CYP90D1
1
0.2%
DWF1
1
0.2%
HYD1
1
0.2%
HDS/IspG
1
0.2%
DXS
1
0.2%
TPS
1
0.2%
CMK/IspE
1
0.2%
HMGR
1
0.2%
MDS/IspF
1
0.2%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 40 | 15 | BAHD (17) | View species results |
| Alkaloid pathway | 34 | 12 | STR (9) | View species results |
| Phenylpropanoid pathway | 26 | 4 | POD (17) | View species results |
| Steroid pathway | 26 | 10 | CAS (9) | View species results |
| Rosmarinic acid pathway | 8 | 3 | CPR (5) | View species results |
| Flavonoid pathway | 5 | 3 | IFR (2) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 21 | 127 | BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 64 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| GBG59386 | Alkaloid | STR | medium | pass |
| GBG59821 | Alkaloid | STR | low | borderline |
| GBG61024 | Alkaloid | STR | low | borderline |
| GBG64535 | Alkaloid | STR | low | borderline |
| GBG66269 | Alkaloid | STR | low | borderline |
| GBG69003 | Alkaloid | STR | medium | pass |
| GBG79617 | Alkaloid | STR | low | borderline |
| GBG80731 | Alkaloid | STR | low | borderline |
| GBG81806 | Alkaloid | STR | low | borderline |
| GBG81810 | Alkaloid | STR | low | borderline |
| GBG85709 | Alkaloid | STR | low | borderline |
| GBG85744 | Alkaloid | STR | medium | pass |
| GBG85748 | Alkaloid | STR | medium | pass |
| GBG85752 | Alkaloid | STR | medium | pass |
| GBG85757 | Alkaloid | STR | medium | pass |
| GBG88274 | Alkaloid | STR | low | borderline |
| GBG91036 | Alkaloid | STR | medium | pass |
| GBG68371 | Alkaloid | T16H | low | borderline |
| GBG70028 | Alkaloid | T16H | medium | borderline |
| GBG92357 | Alkaloid | T16H | medium | borderline |
| GBG84894 | Alkaloid | T3O | low | borderline |
| GBG86175 | Alkaloid | T3O | medium | pass |
| GBG58923 | Alkaloid | TDC | low | borderline |
| GBG86055 | Alkaloid | TDC | low | borderline |
| GBG44238 | Alkaloid | TRI/TRII | low | borderline |
| GBG59166 | Alkaloid | TRI/TRII | low | borderline |
| GBG63639 | Alkaloid | TRI/TRII | medium | pass |
| GBG67440 | Alkaloid | TRI/TRII | medium | pass |
| GBG70412 | Alkaloid | TRI/TRII | low | borderline |
| GBG70413 | Alkaloid | TRI/TRII | low | borderline |
| GBG72424 | Alkaloid | TRI/TRII | low | borderline |
| GBG80237 | Alkaloid | TRI/TRII | medium | pass |
| GBG88836 | Alkaloid | TRI/TRII | low | borderline |
| GBG59047 | Alkaloid | TYDC_DDC | low | borderline |
| GBG82765 | Alkaloid | TYDC_DDC | medium | borderline |
| GBG62926 | Flavonoid | 4CL | low | borderline |
| GBG63422 | Flavonoid | 4CL | low | borderline |
| GBG65673 | Flavonoid | 4CL | low | borderline |
| GBG68478 | Flavonoid | 4CL | low | borderline |
| GBG68482 | Flavonoid | 4CL | low | borderline |
| GBG75139 | Flavonoid | 4CL | low | borderline |
| GBG75893 | Flavonoid | 4CL | low | borderline |
| GBG81530 | Flavonoid | 4CL | low | borderline |
| GBG84849 | Flavonoid | 4CL | medium | pass |
| GBG84778 | Flavonoid | ANR | low | borderline |
| GBG60692 | Flavonoid | C4H | medium | borderline |
| GBG87562 | Flavonoid | C4H | low | borderline |
| GBG59781 | Flavonoid | CHI | low | borderline |
| GBG62607 | Flavonoid | CHI | low | borderline |
| GBG76041 | Flavonoid | CHI | low | borderline |