Cicer reticulatum (cicer_reticulatum)
/
Imported from atlas release summary for Cicer reticulatum.
1197
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1197
Candidate Genes
C3'H/CYP98A
5.5%
BAHD
5.47%
C4H
5.15%
4CL
4.97%
UGT
4.73%
UFGT
4.37%
7DLGT
4.34%
POD
4.06%
Other Families
61.41%
More Families (96)
IFS
98
3.46%
CYP76
94
3.32%
T3O
85
3.0%
F3H
85
3.0%
NMT
72
2.54%
DWF4/CYP90B1
62
2.19%
STR
54
1.9%
CODM/T6ODM
52
1.83%
F3'H/CYP75B
46
1.62%
H6H
45
1.59%
BR6OX2/CYP85A2
45
1.59%
SMT1/SMT2/SMT3
41
1.45%
CYP71
36
1.27%
SGD
35
1.23%
CSE
33
1.16%
PYKS
32
1.13%
TRI/TRII
31
1.09%
CAD
31
1.09%
LAC
30
1.06%
COMT
27
0.95%
RAS
27
0.95%
IFR
26
0.92%
GS
24
0.85%
IO
24
0.85%
CAS
24
0.85%
HCT
23
0.81%
PMT
20
0.71%
7DLH
19
0.67%
COR
19
0.67%
ANR
19
0.67%
CCR
19
0.67%
16OMT
18
0.63%
TPS
18
0.63%
T16H
17
0.6%
BBE
17
0.6%
GES
17
0.6%
BR6OX1/CYP85A1
17
0.6%
CYP90D1
17
0.6%
FNS
16
0.56%
SLS
15
0.53%
PAL
15
0.53%
CYP51G1
15
0.53%
F3'5'H/CYP75A
14
0.49%
NCS
13
0.46%
ROT3/CYP90C1
13
0.46%
G8O/G8H
12
0.42%
CNMT
11
0.39%
TAT
11
0.39%
CPD/CYP90A1
11
0.39%
8HGO
10
0.35%
ANS/LDOX
10
0.35%
CHS
10
0.35%
DFR
9
0.32%
MVD
9
0.32%
MPO
8
0.28%
DET2
8
0.28%
GGPPS
8
0.28%
DXS
8
0.28%
AACT
8
0.28%
CHI
7
0.25%
F5H/CYP84A
7
0.25%
CCoAOMT
7
0.25%
CPR
7
0.25%
SQS/FDFT1
7
0.25%
LAMT
6
0.21%
HPPR
6
0.21%
ISY
5
0.18%
CYP719
4
0.14%
SQE
4
0.14%
SMO1/SMO2
4
0.14%
TDC
3
0.11%
FLS
3
0.11%
HMGR
3
0.11%
MVK
3
0.11%
MCT/IspD
3
0.11%
CYP80B1
2
0.07%
ODC
2
0.07%
TYDC_DDC
2
0.07%
DWF1
2
0.07%
FPPS
2
0.07%
DXR
2
0.07%
HDR/IspH
2
0.07%
HMGS
2
0.07%
CYP80F1
1
0.04%
XMT_MXMT_DXMT
1
0.04%
ADC
1
0.04%
FK
1
0.04%
CPI1
1
0.04%
DWF7
1
0.04%
DWF5
1
0.04%
HYD1
1
0.04%
IDI
1
0.04%
HDS/IspG
1
0.04%
PMK
1
0.04%
CMK/IspE
1
0.04%
MDS/IspF
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 325 | 19 | UGT (131) | View species results |
| Alkaloid pathway | 269 | 20 | 7DLGT (56) | View species results |
| Phenylpropanoid pathway | 255 | 11 | POD (106) | View species results |
| Flavonoid pathway | 178 | 9 | UFGT (114) | View species results |
| Rosmarinic acid pathway | 106 | 7 | C4H (42) | View species results |
| Steroid pathway | 64 | 13 | SMT1/SMT2/SMT3 (23) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 956 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 205 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Cr_07487.1|Cr_LG_3:37545918-37549347|plus| | Terpenoid | BAHD | medium | pass | BAHD__00029__sp_O80685_ZDHC4_ARATH |
| Cr_07488.1|Cr_LG_3:37554182-37557963|plus| | Terpenoid | BAHD | medium | pass | BAHD__00085__sp_Q9M1K5_ZDH13_ARATH |
| Cr_07501.1|Cr_LG_3:37716850-37721853|minus| | Terpenoid | BAHD | low | borderline | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |
| Cr_07516.1|Cr_LG_3:37857696-37859698|plus| | Terpenoid | BAHD | low | borderline | BAHD__00012__sp_A1XWY7_CFAT_PETHY |
| Cr_07630.1|Cr_LG_3:38765358-38770277|plus| | Terpenoid | BAHD | medium | pass | BAHD__00048__sp_Q5M757_ZDH15_ARATH |
| Cr_07764.1|Cr_LG_4:345647-348823|minus| | Terpenoid | BAHD | medium | pass | BAHD__00023__sp_O22975_LPAAT_ARATH |
| Cr_07967.1|Cr_LG_4:2681957-2685407|plus| | Terpenoid | BAHD | medium | pass | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |
| Cr_07975.1|Cr_LG_4:2880378-2881241|minus| | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| Cr_08076.1|Cr_LG_4:4470060-4471570|minus| | Terpenoid | BAHD | medium | pass | BAHD__00089__sp_Q9SB58_ZDH19_ARATH |
| Cr_08137.1|Cr_LG_4:5192297-5201826|minus| | Terpenoid | BAHD | low | borderline | BAHD__00036__sp_Q10L01_ZDHC9_ORYSJ |
| Cr_08181.1|Cr_LG_4:5566264-5571304|plus| | Terpenoid | BAHD | low | borderline | BAHD__00097__sp_Q9ZV87_NAPES_ARATH |
| Cr_08511.1|Cr_LG_4:9179979-9184090|minus| | Terpenoid | BAHD | medium | pass | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| Cr_08615.1|Cr_LG_4:11291760-11295604|plus| | Terpenoid | BAHD | medium | pass | BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH |
| Cr_09104.1|Cr_LG_4:18423092-18427918|plus| | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| Cr_09115.1|Cr_LG_4:18566221-18570897|plus| | Terpenoid | BAHD | medium | pass | BAHD__00042__sp_Q500Z2_ZDH20_ARATH |
| Cr_09125.1|Cr_LG_4:18656111-18657169|minus| | Terpenoid | BAHD | low | borderline | BAHD__00010__sp_A0AAW1LG41_BAHD1_SAPOF |
| Cr_09288.1|Cr_LG_4:20293630-20296307|plus| | Terpenoid | BAHD | medium | pass | BAHD__00084__sp_Q9M115_ZDH16_ARATH |
| Cr_09313.1|Cr_LG_4:20561706-20563268|minus| | Terpenoid | BAHD | medium | pass | BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH |
| Cr_09356.1|Cr_LG_4:20938148-20939889|minus| | Terpenoid | BAHD | medium | pass | BAHD__00057__sp_Q8L7R3_LPCT1_ARATH |
| Cr_09391.1|Cr_LG_4:21351301-21356018|plus| | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| Cr_09658.1|Cr_LG_4:24687259-24689238|plus| | Terpenoid | BAHD | low | borderline | BAHD__00054__sp_Q8GYW8_SCT_ARATH |
| Cr_11059.1|Cr_LG_4:47901606-47904398|plus| | Terpenoid | BAHD | low | borderline | BAHD__00059__sp_Q8S8S2_LPCT2_ARATH |
| Cr_11080.1|Cr_LG_4:48635530-48637273|plus| | Terpenoid | BAHD | medium | pass | BAHD__00022__sp_K7PEY4_RAM2_MEDTR |
| Cr_11100.1|Cr_LG_4:49111404-49123648|plus| | Terpenoid | BAHD | medium | pass | BAHD__00058__sp_Q8LG50_LPAT2_ARATH |
| Cr_11195.1|Cr_LG_4:51213959-51224149|plus| | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| Cr_11218.1|Cr_LG_5:29818-32647|plus| | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| Cr_11357.1|Cr_LG_5:1949811-1951232|plus| | Terpenoid | BAHD | medium | pass | BAHD__00031__sp_P0DO25_AT9_ACTDE |
| Cr_11670.1|Cr_LG_5:6441452-6461997|plus| | Terpenoid | BAHD | low | borderline | BAHD__00050__sp_Q6DR03_ZDHC3_ARATH |
| Cr_12214.1|Cr_LG_5:13400573-13404847|minus| | Terpenoid | BAHD | low | borderline | BAHD__00025__sp_O64810_SCP10_ARATH |
| Cr_12511.1|Cr_LG_5:16574079-16577177|minus| | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| Cr_12699.1|Cr_LG_5:19097398-19098620|plus| | Terpenoid | BAHD | medium | pass | BAHD__00012__sp_A1XWY7_CFAT_PETHY |
| Cr_12734.1|Cr_LG_5:19446473-19451836|plus| | Terpenoid | BAHD | medium | pass | BAHD__00023__sp_O22975_LPAAT_ARATH |
| Cr_13188.1|Cr_LG_5:24782729-24783950|plus| | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Cr_13190.1|Cr_LG_5:24831582-24832985|plus| | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Cr_13214.1|Cr_LG_5:25392885-25393451|minus| | Terpenoid | BAHD | medium | pass | BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH |
| Cr_13377.1|Cr_LG_5:28242386-28242913|minus| | Terpenoid | BAHD | medium | pass | BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH |
| Cr_13478.1|Cr_LG_5:30573805-30577633|plus| | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Cr_14372.1|Cr_LG_6:3037792-3039192|plus| | Terpenoid | BAHD | low | borderline | BAHD__00032__sp_P0DO84_AT_STRNX |
| Cr_14375.1|Cr_LG_6:3072182-3073579|minus| | Terpenoid | BAHD | low | borderline | BAHD__00032__sp_P0DO84_AT_STRNX |
| Cr_14641.1|Cr_LG_6:6273444-6276927|minus| | Terpenoid | BAHD | medium | pass | BAHD__00094__sp_Q9SYC8_LPAT3_ARATH |
| Cr_14708.1|Cr_LG_6:7015131-7016525|minus| | Terpenoid | BAHD | medium | pass | BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN |
| Cr_14753.1|Cr_LG_6:7903980-7909355|plus| | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Cr_14840.1|Cr_LG_6:9097862-9099604|minus| | Terpenoid | BAHD | low | borderline | BAHD__00066__sp_Q94CK0_WSD7_ARATH |
| Cr_14905.1|Cr_LG_6:9945679-9948115|plus| | Terpenoid | BAHD | medium | pass | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| Cr_14917.1|Cr_LG_6:10136397-10139620|plus| | Terpenoid | BAHD | low | borderline | BAHD__00025__sp_O64810_SCP10_ARATH |
| Cr_15258.1|Cr_LG_6:13805052-13811543|minus| | Terpenoid | BAHD | medium | pass | BAHD__00038__sp_Q3EC11_ZDHC2_ARATH |
| Cr_15631.1|Cr_LG_6:19019460-19026585|plus| | Terpenoid | BAHD | medium | pass | BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH |
| Cr_16172.1|Cr_LG_6:25224356-25228537|plus| | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Cr_16377.1|Cr_LG_6:28722536-28724228|minus| | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Cr_16449.1|Cr_LG_6:29714031-29720065|plus| | Terpenoid | BAHD | medium | pass | BAHD__00068__sp_Q9C533_ZDHC1_ARATH |