Cicer reticulatum (cicer_reticulatum)
/
Imported from atlas release summary for Cicer reticulatum.
1432
Candidate Protein Records
1197
Pathway-Level Records
2835
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
2835
Family-Level Calls
C3'H/CYP98A
5.5%
BAHD
5.47%
C4H
5.15%
4CL
4.97%
UGT
4.73%
UFGT
4.37%
7DLGT
4.34%
POD
4.06%
Other Families
61.41%
More Families (96)
IFS
98
3.46%
CYP76
94
3.32%
T3O
85
3.0%
F3H
85
3.0%
NMT
72
2.54%
DWF4/CYP90B1
62
2.19%
STR
54
1.9%
CODM/T6ODM
52
1.83%
F3'H/CYP75B
46
1.62%
H6H
45
1.59%
BR6OX2/CYP85A2
45
1.59%
SMT1/SMT2/SMT3
41
1.45%
CYP71
36
1.27%
SGD
35
1.23%
CSE
33
1.16%
PYKS
32
1.13%
TRI/TRII
31
1.09%
CAD
31
1.09%
LAC
30
1.06%
COMT
27
0.95%
RAS
27
0.95%
IFR
26
0.92%
GS
24
0.85%
IO
24
0.85%
CAS
24
0.85%
HCT
23
0.81%
PMT
20
0.71%
7DLH
19
0.67%
COR
19
0.67%
ANR
19
0.67%
CCR
19
0.67%
16OMT
18
0.63%
TPS
18
0.63%
T16H
17
0.6%
BBE
17
0.6%
GES
17
0.6%
BR6OX1/CYP85A1
17
0.6%
CYP90D1
17
0.6%
FNS
16
0.56%
SLS
15
0.53%
PAL
15
0.53%
CYP51G1
15
0.53%
F3'5'H/CYP75A
14
0.49%
NCS
13
0.46%
ROT3/CYP90C1
13
0.46%
G8O/G8H
12
0.42%
CNMT
11
0.39%
TAT
11
0.39%
CPD/CYP90A1
11
0.39%
8HGO
10
0.35%
ANS/LDOX
10
0.35%
CHS
10
0.35%
DFR
9
0.32%
MVD
9
0.32%
MPO
8
0.28%
DET2
8
0.28%
GGPPS
8
0.28%
DXS
8
0.28%
AACT
8
0.28%
CHI
7
0.25%
F5H/CYP84A
7
0.25%
CCoAOMT
7
0.25%
CPR
7
0.25%
SQS/FDFT1
7
0.25%
LAMT
6
0.21%
HPPR
6
0.21%
ISY
5
0.18%
CYP719
4
0.14%
SQE
4
0.14%
SMO1/SMO2
4
0.14%
TDC
3
0.11%
FLS
3
0.11%
HMGR
3
0.11%
MVK
3
0.11%
MCT/IspD
3
0.11%
CYP80B1
2
0.07%
ODC
2
0.07%
TYDC_DDC
2
0.07%
DWF1
2
0.07%
FPPS
2
0.07%
DXR
2
0.07%
HDR/IspH
2
0.07%
HMGS
2
0.07%
CYP80F1
1
0.04%
XMT_MXMT_DXMT
1
0.04%
ADC
1
0.04%
FK
1
0.04%
CPI1
1
0.04%
DWF7
1
0.04%
DWF5
1
0.04%
HYD1
1
0.04%
IDI
1
0.04%
HDS/IspG
1
0.04%
PMK
1
0.04%
CMK/IspE
1
0.04%
MDS/IspF
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 325 | 19 | UGT (131) | View species results |
| Alkaloid pathway | 269 | 20 | 7DLGT (56) | View species results |
| Phenylpropanoid pathway | 255 | 11 | POD (106) | View species results |
| Flavonoid pathway | 178 | 9 | UFGT (114) | View species results |
| Rosmarinic acid pathway | 106 | 7 | C4H (42) | View species results |
| Steroid pathway | 64 | 13 | SMT1/SMT2/SMT3 (23) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 956 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 205 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Cr_18394.1|Cr_LG_7:6606693-6609433|minus| | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Cr_19464.1|Cr_LG_7:25961448-25964559|plus| | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Cr_19469.1|Cr_LG_7:26039263-26040987|plus| | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Cr_22601.1|scaffold820:17731-23746|plus| | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Cr_23038.1|scaffold1239:23971-29854|plus| | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| Cr_23707.1|scaffold1827:22494-24493|plus| | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| Cr_24721.1|scaffold2998:10077-12957|minus| | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| Cr_00779.1|Cr_LG_1:8783853-8788398|plus| | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cr_00922.1|Cr_LG_1:10285140-10292130|plus| | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cr_00983.1|Cr_LG_1:10786662-10796608|plus| | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cr_01067.1|Cr_LG_1:11479481-11486271|minus| | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Cr_01382.1|Cr_LG_1:15070721-15073143|plus| | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Cr_01428.1|Cr_LG_1:15771227-15779928|minus| | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cr_01429.1|Cr_LG_1:15787219-15794046|minus| | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cr_01491.1|Cr_LG_1:16594005-16596366|plus| | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cr_01683.1|Cr_LG_1:19351135-19352991|minus| | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cr_02324.1|Cr_LG_1:33269219-33271702|plus| | Alkaloid | STR | medium | pass | STR__00002__sp_P68175_STSY_RAUSE |
| Cr_03016.1|Cr_LG_1:41395258-41402790|plus| | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cr_03272.1|Cr_LG_2:2522101-2526122|plus| | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cr_03942.1|Cr_LG_2:12985184-12996791|minus| | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cr_04967.1|Cr_LG_2:32104970-32128907|plus| | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cr_05376.1|Cr_LG_3:4045783-4054841|minus| | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cr_05378.1|Cr_LG_3:4076799-4087410|plus| | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cr_05473.1|Cr_LG_3:4922852-4932432|minus| | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cr_05711.1|Cr_LG_3:7060730-7062763|plus| | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cr_05839.1|Cr_LG_3:8813770-8816977|plus| | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Cr_05840.1|Cr_LG_3:8818108-8821571|plus| | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Cr_05873.1|Cr_LG_3:9195996-9218396|minus| | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cr_07726.1|Cr_LG_3:39689687-39696494|minus| | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cr_08033.1|Cr_LG_4:3849936-3851771|minus| | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cr_08678.1|Cr_LG_4:12252171-12254781|plus| | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cr_08717.1|Cr_LG_4:12908644-12916177|plus| | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cr_08735.1|Cr_LG_4:13126804-13143443|minus| | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cr_09075.1|Cr_LG_4:17925687-17938219|minus| | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cr_09096.1|Cr_LG_4:18305665-18309144|plus| | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cr_09119.1|Cr_LG_4:18610230-18617604|plus| | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cr_09659.1|Cr_LG_4:24697773-24707479|plus| | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cr_09660.1|Cr_LG_4:24715514-24724686|plus| | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cr_09761.1|Cr_LG_4:26109862-26119824|minus| | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cr_10384.1|Cr_LG_4:34346893-34352833|plus| | Alkaloid | STR | low | borderline | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Cr_10492.1|Cr_LG_4:35812731-35819992|plus| | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cr_11154.1|Cr_LG_4:50335089-50348925|minus| | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cr_12854.1|Cr_LG_5:20825757-20827670|minus| | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cr_13163.1|Cr_LG_5:24302995-24314042|plus| | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cr_13370.1|Cr_LG_5:28105074-28109980|plus| | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cr_14396.1|Cr_LG_6:3284776-3287870|minus| | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cr_15310.1|Cr_LG_6:14211736-14215048|plus| | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cr_15312.1|Cr_LG_6:14231528-14235297|minus| | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Cr_16490.1|Cr_LG_6:30348631-30352730|minus| | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Cr_16499.1|Cr_LG_6:30491558-30498595|plus| | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |