Cicer reticulatum (cicer_reticulatum)
/
Imported from atlas release summary for Cicer reticulatum.
1432
Candidate Protein Records
1197
Pathway-Level Records
2835
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
2835
Family-Level Calls
C3'H/CYP98A
5.5%
BAHD
5.47%
C4H
5.15%
4CL
4.97%
UGT
4.73%
UFGT
4.37%
7DLGT
4.34%
POD
4.06%
Other Families
61.41%
More Families (96)
IFS
98
3.46%
CYP76
94
3.32%
T3O
85
3.0%
F3H
85
3.0%
NMT
72
2.54%
DWF4/CYP90B1
62
2.19%
STR
54
1.9%
CODM/T6ODM
52
1.83%
F3'H/CYP75B
46
1.62%
H6H
45
1.59%
BR6OX2/CYP85A2
45
1.59%
SMT1/SMT2/SMT3
41
1.45%
CYP71
36
1.27%
SGD
35
1.23%
CSE
33
1.16%
PYKS
32
1.13%
TRI/TRII
31
1.09%
CAD
31
1.09%
LAC
30
1.06%
COMT
27
0.95%
RAS
27
0.95%
IFR
26
0.92%
GS
24
0.85%
IO
24
0.85%
CAS
24
0.85%
HCT
23
0.81%
PMT
20
0.71%
7DLH
19
0.67%
COR
19
0.67%
ANR
19
0.67%
CCR
19
0.67%
16OMT
18
0.63%
TPS
18
0.63%
T16H
17
0.6%
BBE
17
0.6%
GES
17
0.6%
BR6OX1/CYP85A1
17
0.6%
CYP90D1
17
0.6%
FNS
16
0.56%
SLS
15
0.53%
PAL
15
0.53%
CYP51G1
15
0.53%
F3'5'H/CYP75A
14
0.49%
NCS
13
0.46%
ROT3/CYP90C1
13
0.46%
G8O/G8H
12
0.42%
CNMT
11
0.39%
TAT
11
0.39%
CPD/CYP90A1
11
0.39%
8HGO
10
0.35%
ANS/LDOX
10
0.35%
CHS
10
0.35%
DFR
9
0.32%
MVD
9
0.32%
MPO
8
0.28%
DET2
8
0.28%
GGPPS
8
0.28%
DXS
8
0.28%
AACT
8
0.28%
CHI
7
0.25%
F5H/CYP84A
7
0.25%
CCoAOMT
7
0.25%
CPR
7
0.25%
SQS/FDFT1
7
0.25%
LAMT
6
0.21%
HPPR
6
0.21%
ISY
5
0.18%
CYP719
4
0.14%
SQE
4
0.14%
SMO1/SMO2
4
0.14%
TDC
3
0.11%
FLS
3
0.11%
HMGR
3
0.11%
MVK
3
0.11%
MCT/IspD
3
0.11%
CYP80B1
2
0.07%
ODC
2
0.07%
TYDC_DDC
2
0.07%
DWF1
2
0.07%
FPPS
2
0.07%
DXR
2
0.07%
HDR/IspH
2
0.07%
HMGS
2
0.07%
CYP80F1
1
0.04%
XMT_MXMT_DXMT
1
0.04%
ADC
1
0.04%
FK
1
0.04%
CPI1
1
0.04%
DWF7
1
0.04%
DWF5
1
0.04%
HYD1
1
0.04%
IDI
1
0.04%
HDS/IspG
1
0.04%
PMK
1
0.04%
CMK/IspE
1
0.04%
MDS/IspF
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 325 | 19 | UGT (131) | View species results |
| Alkaloid pathway | 269 | 20 | 7DLGT (56) | View species results |
| Phenylpropanoid pathway | 255 | 11 | POD (106) | View species results |
| Flavonoid pathway | 178 | 9 | UFGT (114) | View species results |
| Rosmarinic acid pathway | 106 | 7 | C4H (42) | View species results |
| Steroid pathway | 64 | 13 | SMT1/SMT2/SMT3 (23) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 956 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 205 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Cr_11323.1|Cr_LG_5:1202484-1204055|plus| | Steroid | BR6OX2/CYP85A2 | low | borderline |
| Cr_11326.1|Cr_LG_5:1233139-1234758|plus| | Steroid | BR6OX2/CYP85A2 | low | borderline |
| Cr_11629.1|Cr_LG_5:5864799-5868896|plus| | Steroid | BR6OX2/CYP85A2 | low | borderline |
| Cr_12963.1|Cr_LG_5:21936051-21943209|minus| | Steroid | BR6OX2/CYP85A2 | low | borderline |
| Cr_14667.1|Cr_LG_6:6514309-6515253|minus| | Steroid | BR6OX2/CYP85A2 | medium | borderline |
| Cr_14857.1|Cr_LG_6:9524620-9526315|plus| | Steroid | BR6OX2/CYP85A2 | low | borderline |
| Cr_15005.1|Cr_LG_6:11011544-11013439|plus| | Steroid | BR6OX2/CYP85A2 | low | borderline |
| Cr_15226.1|Cr_LG_6:13454878-13456012|minus| | Steroid | BR6OX2/CYP85A2 | low | borderline |
| Cr_15245.1|Cr_LG_6:13668536-13670552|minus| | Steroid | BR6OX2/CYP85A2 | medium | borderline |
| Cr_15995.1|Cr_LG_6:23010214-23011797|plus| | Steroid | BR6OX2/CYP85A2 | low | borderline |
| Cr_17055.1|Cr_LG_6:41138666-41140575|plus| | Steroid | BR6OX2/CYP85A2 | low | borderline |
| Cr_17609.1|Cr_LG_6:52542120-52543831|minus| | Steroid | BR6OX2/CYP85A2 | low | borderline |
| Cr_17712.1|Cr_LG_6:54071264-54084985|minus| | Steroid | BR6OX2/CYP85A2 | low | borderline |
| Cr_18199.1|Cr_LG_7:3962275-3964276|plus| | Steroid | BR6OX2/CYP85A2 | low | borderline |
| Cr_18394.1|Cr_LG_7:6606693-6609433|minus| | Steroid | BR6OX2/CYP85A2 | low | borderline |
| Cr_18450.1|Cr_LG_7:7521412-7523349|plus| | Steroid | BR6OX2/CYP85A2 | low | borderline |
| Cr_18666.1|Cr_LG_7:10491830-10493356|plus| | Steroid | BR6OX2/CYP85A2 | low | borderline |
| Cr_19362.1|Cr_LG_7:24771824-24774528|minus| | Steroid | BR6OX2/CYP85A2 | low | borderline |
| Cr_19464.1|Cr_LG_7:25961448-25964559|plus| | Steroid | BR6OX2/CYP85A2 | medium | borderline |
| Cr_19728.1|Cr_LG_7:28992845-28997242|minus| | Steroid | BR6OX2/CYP85A2 | low | borderline |
| Cr_20450.1|Cr_LG_8:409278-411247|plus| | Steroid | BR6OX2/CYP85A2 | low | borderline |
| Cr_20478.1|Cr_LG_8:668732-670516|minus| | Steroid | BR6OX2/CYP85A2 | low | borderline |
| Cr_20479.1|Cr_LG_8:682450-682945|minus| | Steroid | BR6OX2/CYP85A2 | low | borderline |
| Cr_21873.1|Cr_LG_8:16842899-16844968|minus| | Steroid | BR6OX2/CYP85A2 | low | borderline |
| Cr_22130.1|Cr_LG_8:20086645-20087109|minus| | Steroid | BR6OX2/CYP85A2 | low | borderline |
| Cr_22601.1|scaffold820:17731-23746|plus| | Steroid | BR6OX2/CYP85A2 | low | borderline |
| Cr_23038.1|scaffold1239:23971-29854|plus| | Steroid | BR6OX2/CYP85A2 | low | borderline |
| Cr_23143.1|scaffold1328:54516-55154|minus| | Steroid | BR6OX2/CYP85A2 | low | borderline |
| Cr_23775.1|scaffold1887:31597-32720|plus| | Steroid | BR6OX2/CYP85A2 | low | borderline |
| Cr_24721.1|scaffold2998:10077-12957|minus| | Steroid | BR6OX2/CYP85A2 | low | borderline |
| Cr_00341.1|Cr_LG_1:3369864-3375021|plus| | Steroid | CAS | medium | pass |
| Cr_01678.1|Cr_LG_1:19266858-19269695|plus| | Steroid | CAS | low | borderline |
| Cr_02008.1|Cr_LG_1:26079503-26119070|minus| | Steroid | CAS | medium | pass |
| Cr_03250.1|Cr_LG_2:2344252-2347219|plus| | Steroid | CAS | medium | pass |
| Cr_03887.1|Cr_LG_2:12068918-12072086|minus| | Steroid | CAS | low | borderline |
| Cr_06011.1|Cr_LG_3:10551410-10556609|plus| | Steroid | CAS | medium | pass |
| Cr_06065.1|Cr_LG_3:11387875-11391421|plus| | Steroid | CAS | medium | pass |
| Cr_07310.1|Cr_LG_3:35352481-35356056|minus| | Steroid | CAS | medium | pass |
| Cr_09036.1|Cr_LG_4:17524073-17526916|plus| | Steroid | CAS | medium | pass |
| Cr_10113.1|Cr_LG_4:31380034-31383873|minus| | Steroid | CAS | medium | pass |
| Cr_11482.1|Cr_LG_5:3772998-3777304|plus| | Steroid | CAS | medium | pass |
| Cr_15194.1|Cr_LG_6:13093420-13099832|plus| | Steroid | CAS | medium | pass |
| Cr_15509.1|Cr_LG_6:16688303-16699198|plus| | Steroid | CAS | medium | pass |
| Cr_15520.1|Cr_LG_6:16848255-16851440|plus| | Steroid | CAS | medium | pass |
| Cr_17667.1|Cr_LG_6:53295907-53316953|minus| | Steroid | CAS | low | borderline |
| Cr_18581.1|Cr_LG_7:9267456-9271905|minus| | Steroid | CAS | medium | pass |
| Cr_19419.1|Cr_LG_7:25547202-25550156|minus| | Steroid | CAS | medium | pass |
| Cr_21632.1|Cr_LG_8:13574191-13578738|plus| | Steroid | CAS | medium | pass |
| Cr_22023.1|Cr_LG_8:19035106-19041992|plus| | Steroid | CAS | medium | pass |
| Cr_22024.1|Cr_LG_8:19042609-19047022|minus| | Steroid | CAS | medium | pass |