Cicer reticulatum (cicer_reticulatum)
/
Imported from atlas release summary for Cicer reticulatum.
1432
Candidate Protein Records
1197
Pathway-Level Records
2835
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
2835
Family-Level Calls
C3'H/CYP98A
5.5%
BAHD
5.47%
C4H
5.15%
4CL
4.97%
UGT
4.73%
UFGT
4.37%
7DLGT
4.34%
POD
4.06%
Other Families
61.41%
More Families (96)
IFS
98
3.46%
CYP76
94
3.32%
T3O
85
3.0%
F3H
85
3.0%
NMT
72
2.54%
DWF4/CYP90B1
62
2.19%
STR
54
1.9%
CODM/T6ODM
52
1.83%
F3'H/CYP75B
46
1.62%
H6H
45
1.59%
BR6OX2/CYP85A2
45
1.59%
SMT1/SMT2/SMT3
41
1.45%
CYP71
36
1.27%
SGD
35
1.23%
CSE
33
1.16%
PYKS
32
1.13%
TRI/TRII
31
1.09%
CAD
31
1.09%
LAC
30
1.06%
COMT
27
0.95%
RAS
27
0.95%
IFR
26
0.92%
GS
24
0.85%
IO
24
0.85%
CAS
24
0.85%
HCT
23
0.81%
PMT
20
0.71%
7DLH
19
0.67%
COR
19
0.67%
ANR
19
0.67%
CCR
19
0.67%
16OMT
18
0.63%
TPS
18
0.63%
T16H
17
0.6%
BBE
17
0.6%
GES
17
0.6%
BR6OX1/CYP85A1
17
0.6%
CYP90D1
17
0.6%
FNS
16
0.56%
SLS
15
0.53%
PAL
15
0.53%
CYP51G1
15
0.53%
F3'5'H/CYP75A
14
0.49%
NCS
13
0.46%
ROT3/CYP90C1
13
0.46%
G8O/G8H
12
0.42%
CNMT
11
0.39%
TAT
11
0.39%
CPD/CYP90A1
11
0.39%
8HGO
10
0.35%
ANS/LDOX
10
0.35%
CHS
10
0.35%
DFR
9
0.32%
MVD
9
0.32%
MPO
8
0.28%
DET2
8
0.28%
GGPPS
8
0.28%
DXS
8
0.28%
AACT
8
0.28%
CHI
7
0.25%
F5H/CYP84A
7
0.25%
CCoAOMT
7
0.25%
CPR
7
0.25%
SQS/FDFT1
7
0.25%
LAMT
6
0.21%
HPPR
6
0.21%
ISY
5
0.18%
CYP719
4
0.14%
SQE
4
0.14%
SMO1/SMO2
4
0.14%
TDC
3
0.11%
FLS
3
0.11%
HMGR
3
0.11%
MVK
3
0.11%
MCT/IspD
3
0.11%
CYP80B1
2
0.07%
ODC
2
0.07%
TYDC_DDC
2
0.07%
DWF1
2
0.07%
FPPS
2
0.07%
DXR
2
0.07%
HDR/IspH
2
0.07%
HMGS
2
0.07%
CYP80F1
1
0.04%
XMT_MXMT_DXMT
1
0.04%
ADC
1
0.04%
FK
1
0.04%
CPI1
1
0.04%
DWF7
1
0.04%
DWF5
1
0.04%
HYD1
1
0.04%
IDI
1
0.04%
HDS/IspG
1
0.04%
PMK
1
0.04%
CMK/IspE
1
0.04%
MDS/IspF
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 325 | 19 | UGT (131) | View species results |
| Alkaloid pathway | 269 | 20 | 7DLGT (56) | View species results |
| Phenylpropanoid pathway | 255 | 11 | POD (106) | View species results |
| Flavonoid pathway | 178 | 9 | UFGT (114) | View species results |
| Rosmarinic acid pathway | 106 | 7 | C4H (42) | View species results |
| Steroid pathway | 64 | 13 | SMT1/SMT2/SMT3 (23) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 956 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 205 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Cr_06426.1|Cr_LG_3:16359367-16365272|plus| | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Cr_06464.1|Cr_LG_3:17001418-17010169|minus| | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| Cr_07084.1|Cr_LG_3:30147201-30152668|minus| | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| Cr_08484.1|Cr_LG_4:8804284-8808181|plus| | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| Cr_09104.1|Cr_LG_4:18423092-18427918|plus| | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Cr_09391.1|Cr_LG_4:21351301-21356018|plus| | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| Cr_09628.1|Cr_LG_4:24377642-24380765|plus| | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Cr_11195.1|Cr_LG_4:51213959-51224149|plus| | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Cr_11218.1|Cr_LG_5:29818-32647|plus| | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Cr_12214.1|Cr_LG_5:13400573-13404847|minus| | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Cr_12511.1|Cr_LG_5:16574079-16577177|minus| | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| Cr_12695.1|Cr_LG_5:19061149-19062228|plus| | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| Cr_13478.1|Cr_LG_5:30573805-30577633|plus| | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| Cr_13803.1|Cr_LG_5:38549484-38561080|plus| | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| Cr_14403.1|Cr_LG_6:3340062-3346515|minus| | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Cr_14753.1|Cr_LG_6:7903980-7909355|plus| | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Cr_14917.1|Cr_LG_6:10136397-10139620|plus| | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Cr_16172.1|Cr_LG_6:25224356-25228537|plus| | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| Cr_16377.1|Cr_LG_6:28722536-28724228|minus| | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Cr_16819.1|Cr_LG_6:35468622-35469845|plus| | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| Cr_18081.1|Cr_LG_7:1781616-1786726|plus| | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| Cr_20690.1|Cr_LG_8:2683041-2695695|minus| | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Cr_21007.1|Cr_LG_8:6155445-6158874|minus| | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| Cr_21777.1|Cr_LG_8:15055771-15061175|plus| | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Cr_22552.1|scaffold750:80052-84554|minus| | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Cr_23277.1|scaffold1482:320-3437|minus| | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| Cr_23278.1|scaffold1482:19775-65677|minus| | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| Cr_23527.1|scaffold1675:55906-57823|plus| | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| Cr_23592.1|scaffold1729:20210-24160|plus| | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Cr_24304.1|scaffold2432:27319-30130|minus| | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| Cr_24435.1|scaffold2585:10238-14106|plus| | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| Cr_24772.1|scaffold3096:8662-14546|plus| | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| Cr_00175.1|Cr_LG_1:1516212-1519484|plus| | Steroid | SQE | medium | pass |
| Cr_02852.1|Cr_LG_1:39866359-39871416|plus| | Steroid | SQE | medium | pass |
| Cr_05273.1|Cr_LG_3:2882831-2886631|minus| | Steroid | SQE | medium | pass |
| Cr_15254.1|Cr_LG_6:13775818-13780044|minus| | Steroid | SQE | medium | pass |
| Cr_03001.1|Cr_LG_1:41249507-41252299|minus| | Steroid | SQS/FDFT1 | low | borderline |
| Cr_03205.1|Cr_LG_2:1892145-1894780|plus| | Steroid | SQS/FDFT1 | medium | pass |
| Cr_12362.1|Cr_LG_5:14862240-14864217|plus| | Steroid | SQS/FDFT1 | low | borderline |
| Cr_13425.1|Cr_LG_5:29366359-29370469|minus| | Steroid | SQS/FDFT1 | medium | pass |
| Cr_15812.1|Cr_LG_6:21154049-21161964|minus| | Steroid | SQS/FDFT1 | high | pass |
| Cr_18029.1|Cr_LG_7:1118700-1122715|plus| | Steroid | SQS/FDFT1 | medium | pass |
| Cr_21267.1|Cr_LG_8:8574550-8576579|plus| | Steroid | SQS/FDFT1 | low | borderline |
| Cr_03424.1|Cr_LG_2:4326242-4329722|minus| | Terpenoid | AACT | medium | borderline |
| Cr_07836.1|Cr_LG_4:1302044-1307028|minus| | Terpenoid | AACT | low | borderline |
| Cr_11014.1|Cr_LG_4:46798412-46802896|minus| | Terpenoid | AACT | medium | borderline |
| Cr_22038.1|Cr_LG_8:19186783-19197039|plus| | Terpenoid | AACT | low | borderline |
| Cr_23367.1|scaffold1540:26267-31428|minus| | Terpenoid | AACT | medium | borderline |
| Cr_23558.1|scaffold1700:35259-40446|plus| | Terpenoid | AACT | medium | borderline |
| Cr_25209.1|scaffold4755:1022-2161|minus| | Terpenoid | AACT | medium | borderline |