Cicer reticulatum (cicer_reticulatum)
/
Imported from atlas release summary for Cicer reticulatum.
1432
Candidate Protein Records
1197
Pathway-Level Records
2835
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
2835
Family-Level Calls
C3'H/CYP98A
5.5%
BAHD
5.47%
C4H
5.15%
4CL
4.97%
UGT
4.73%
UFGT
4.37%
7DLGT
4.34%
POD
4.06%
Other Families
61.41%
More Families (96)
IFS
98
3.46%
CYP76
94
3.32%
T3O
85
3.0%
F3H
85
3.0%
NMT
72
2.54%
DWF4/CYP90B1
62
2.19%
STR
54
1.9%
CODM/T6ODM
52
1.83%
F3'H/CYP75B
46
1.62%
H6H
45
1.59%
BR6OX2/CYP85A2
45
1.59%
SMT1/SMT2/SMT3
41
1.45%
CYP71
36
1.27%
SGD
35
1.23%
CSE
33
1.16%
PYKS
32
1.13%
TRI/TRII
31
1.09%
CAD
31
1.09%
LAC
30
1.06%
COMT
27
0.95%
RAS
27
0.95%
IFR
26
0.92%
GS
24
0.85%
IO
24
0.85%
CAS
24
0.85%
HCT
23
0.81%
PMT
20
0.71%
7DLH
19
0.67%
COR
19
0.67%
ANR
19
0.67%
CCR
19
0.67%
16OMT
18
0.63%
TPS
18
0.63%
T16H
17
0.6%
BBE
17
0.6%
GES
17
0.6%
BR6OX1/CYP85A1
17
0.6%
CYP90D1
17
0.6%
FNS
16
0.56%
SLS
15
0.53%
PAL
15
0.53%
CYP51G1
15
0.53%
F3'5'H/CYP75A
14
0.49%
NCS
13
0.46%
ROT3/CYP90C1
13
0.46%
G8O/G8H
12
0.42%
CNMT
11
0.39%
TAT
11
0.39%
CPD/CYP90A1
11
0.39%
8HGO
10
0.35%
ANS/LDOX
10
0.35%
CHS
10
0.35%
DFR
9
0.32%
MVD
9
0.32%
MPO
8
0.28%
DET2
8
0.28%
GGPPS
8
0.28%
DXS
8
0.28%
AACT
8
0.28%
CHI
7
0.25%
F5H/CYP84A
7
0.25%
CCoAOMT
7
0.25%
CPR
7
0.25%
SQS/FDFT1
7
0.25%
LAMT
6
0.21%
HPPR
6
0.21%
ISY
5
0.18%
CYP719
4
0.14%
SQE
4
0.14%
SMO1/SMO2
4
0.14%
TDC
3
0.11%
FLS
3
0.11%
HMGR
3
0.11%
MVK
3
0.11%
MCT/IspD
3
0.11%
CYP80B1
2
0.07%
ODC
2
0.07%
TYDC_DDC
2
0.07%
DWF1
2
0.07%
FPPS
2
0.07%
DXR
2
0.07%
HDR/IspH
2
0.07%
HMGS
2
0.07%
CYP80F1
1
0.04%
XMT_MXMT_DXMT
1
0.04%
ADC
1
0.04%
FK
1
0.04%
CPI1
1
0.04%
DWF7
1
0.04%
DWF5
1
0.04%
HYD1
1
0.04%
IDI
1
0.04%
HDS/IspG
1
0.04%
PMK
1
0.04%
CMK/IspE
1
0.04%
MDS/IspF
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 325 | 19 | UGT (131) | View species results |
| Alkaloid pathway | 269 | 20 | 7DLGT (56) | View species results |
| Phenylpropanoid pathway | 255 | 11 | POD (106) | View species results |
| Flavonoid pathway | 178 | 9 | UFGT (114) | View species results |
| Rosmarinic acid pathway | 106 | 7 | C4H (42) | View species results |
| Steroid pathway | 64 | 13 | SMT1/SMT2/SMT3 (23) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 956 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 205 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Cr_23775.1|scaffold1887:31597-32720|plus| | Phenylpropanoid | C3'H/CYP98A | medium | borderline |
| Cr_24721.1|scaffold2998:10077-12957|minus| | Phenylpropanoid | C3'H/CYP98A | low | borderline |
| Cr_25128.1|scaffold4292:1767-3486|plus| | Phenylpropanoid | C3'H/CYP98A | medium | borderline |
| Cr_02579.1|Cr_LG_1:36751613-36755085|minus| | Phenylpropanoid | C4H/CYP73A | medium | borderline |
| Cr_07179.1|Cr_LG_3:33085716-33090598|minus| | Phenylpropanoid | C4H/CYP73A | low | borderline |
| Cr_09068.1|Cr_LG_4:17885241-17887013|plus| | Phenylpropanoid | C4H/CYP73A | medium | borderline |
| Cr_18048.1|Cr_LG_7:1396706-1400222|minus| | Phenylpropanoid | C4H/CYP73A | medium | borderline |
| Cr_00153.1|Cr_LG_1:1294517-1297684|minus| | Phenylpropanoid | CAD | medium | pass |
| Cr_00341.1|Cr_LG_1:3369864-3375021|plus| | Phenylpropanoid | CAD | low | borderline |
| Cr_00976.1|Cr_LG_1:10732594-10734472|plus| | Phenylpropanoid | CAD | medium | borderline |
| Cr_01678.1|Cr_LG_1:19266858-19269695|plus| | Phenylpropanoid | CAD | low | borderline |
| Cr_02008.1|Cr_LG_1:26079503-26119070|minus| | Phenylpropanoid | CAD | low | borderline |
| Cr_02695.1|Cr_LG_1:38217500-38220646|plus| | Phenylpropanoid | CAD | low | borderline |
| Cr_03658.1|Cr_LG_2:8106305-8109515|minus| | Phenylpropanoid | CAD | low | borderline |
| Cr_03887.1|Cr_LG_2:12068918-12072086|minus| | Phenylpropanoid | CAD | medium | pass |
| Cr_05777.1|Cr_LG_3:7979160-7982381|plus| | Phenylpropanoid | CAD | low | borderline |
| Cr_06924.1|Cr_LG_3:27353382-27356565|minus| | Phenylpropanoid | CAD | medium | borderline |
| Cr_07744.1|Cr_LG_4:110345-114382|minus| | Phenylpropanoid | CAD | medium | borderline |
| Cr_07868.1|Cr_LG_4:1566013-1568536|minus| | Phenylpropanoid | CAD | medium | pass |
| Cr_08798.1|Cr_LG_4:14557373-14559593|plus| | Phenylpropanoid | CAD | low | borderline |
| Cr_08799.1|Cr_LG_4:14572101-14573654|plus| | Phenylpropanoid | CAD | medium | borderline |
| Cr_10322.1|Cr_LG_4:33583334-33587012|plus| | Phenylpropanoid | CAD | medium | pass |
| Cr_11483.1|Cr_LG_5:3792354-3796138|plus| | Phenylpropanoid | CAD | low | borderline |
| Cr_12211.1|Cr_LG_5:13371613-13387978|plus| | Phenylpropanoid | CAD | low | borderline |
| Cr_14952.1|Cr_LG_6:10498261-10506374|minus| | Phenylpropanoid | CAD | low | borderline |
| Cr_15042.1|Cr_LG_6:11386034-11389623|minus| | Phenylpropanoid | CAD | medium | pass |
| Cr_15703.1|Cr_LG_6:19989313-19992912|minus| | Phenylpropanoid | CAD | low | borderline |
| Cr_15704.1|Cr_LG_6:20002067-20006250|plus| | Phenylpropanoid | CAD | medium | borderline |
| Cr_16121.1|Cr_LG_6:24510154-24512947|minus| | Phenylpropanoid | CAD | medium | borderline |
| Cr_16507.1|Cr_LG_6:30609831-30611538|plus| | Phenylpropanoid | CAD | medium | borderline |
| Cr_17360.1|Cr_LG_6:48137892-48141131|plus| | Phenylpropanoid | CAD | low | borderline |
| Cr_18987.1|Cr_LG_7:17321535-17326533|minus| | Phenylpropanoid | CAD | low | borderline |
| Cr_22262.1|scaffold162:215084-218441|minus| | Phenylpropanoid | CAD | medium | pass |
| Cr_22268.1|scaffold162:239882-242096|minus| | Phenylpropanoid | CAD | medium | pass |
| Cr_22280.1|scaffold162:202777-205757|plus| | Phenylpropanoid | CAD | medium | pass |
| Cr_22282.1|scaffold162:249310-251507|plus| | Phenylpropanoid | CAD | medium | pass |
| Cr_22286.1|scaffold162:198860-200709|minus| | Phenylpropanoid | CAD | medium | pass |
| Cr_24672.1|scaffold2910:15212-20016|plus| | Phenylpropanoid | CAD | medium | borderline |
| Cr_00279.1|Cr_LG_1:2599458-2600751|plus| | Phenylpropanoid | CCR | medium | borderline |
| Cr_00644.1|Cr_LG_1:6849023-6851607|minus| | Phenylpropanoid | CCR | medium | pass |
| Cr_00854.1|Cr_LG_1:9660981-9664824|minus| | Phenylpropanoid | CCR | medium | borderline |
| Cr_02918.1|Cr_LG_1:40443071-40449040|minus| | Phenylpropanoid | CCR | low | borderline |
| Cr_03695.1|Cr_LG_2:8851722-8854983|plus| | Phenylpropanoid | CCR | medium | borderline |
| Cr_04866.1|Cr_LG_2:30377351-30382093|minus| | Phenylpropanoid | CCR | medium | pass |
| Cr_05079.1|Cr_LG_3:41113-43110|minus| | Phenylpropanoid | CCR | medium | borderline |
| Cr_05080.1|Cr_LG_3:46149-48259|minus| | Phenylpropanoid | CCR | medium | borderline |
| Cr_07745.1|Cr_LG_4:117155-120953|minus| | Phenylpropanoid | CCR | medium | borderline |
| Cr_10340.1|Cr_LG_4:33754499-33759648|plus| | Phenylpropanoid | CCR | low | borderline |
| Cr_12172.1|Cr_LG_5:12853883-12858735|minus| | Phenylpropanoid | CCR | medium | borderline |
| Cr_15922.1|Cr_LG_6:22293844-22306643|plus| | Phenylpropanoid | CCR | low | borderline |