Cicer reticulatum (cicer_reticulatum)
/
Imported from atlas release summary for Cicer reticulatum.
1432
Candidate Protein Records
1197
Pathway-Level Records
2835
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
2835
Family-Level Calls
C3'H/CYP98A
5.5%
BAHD
5.47%
C4H
5.15%
4CL
4.97%
UGT
4.73%
UFGT
4.37%
7DLGT
4.34%
POD
4.06%
Other Families
61.41%
More Families (96)
IFS
98
3.46%
CYP76
94
3.32%
T3O
85
3.0%
F3H
85
3.0%
NMT
72
2.54%
DWF4/CYP90B1
62
2.19%
STR
54
1.9%
CODM/T6ODM
52
1.83%
F3'H/CYP75B
46
1.62%
H6H
45
1.59%
BR6OX2/CYP85A2
45
1.59%
SMT1/SMT2/SMT3
41
1.45%
CYP71
36
1.27%
SGD
35
1.23%
CSE
33
1.16%
PYKS
32
1.13%
TRI/TRII
31
1.09%
CAD
31
1.09%
LAC
30
1.06%
COMT
27
0.95%
RAS
27
0.95%
IFR
26
0.92%
GS
24
0.85%
IO
24
0.85%
CAS
24
0.85%
HCT
23
0.81%
PMT
20
0.71%
7DLH
19
0.67%
COR
19
0.67%
ANR
19
0.67%
CCR
19
0.67%
16OMT
18
0.63%
TPS
18
0.63%
T16H
17
0.6%
BBE
17
0.6%
GES
17
0.6%
BR6OX1/CYP85A1
17
0.6%
CYP90D1
17
0.6%
FNS
16
0.56%
SLS
15
0.53%
PAL
15
0.53%
CYP51G1
15
0.53%
F3'5'H/CYP75A
14
0.49%
NCS
13
0.46%
ROT3/CYP90C1
13
0.46%
G8O/G8H
12
0.42%
CNMT
11
0.39%
TAT
11
0.39%
CPD/CYP90A1
11
0.39%
8HGO
10
0.35%
ANS/LDOX
10
0.35%
CHS
10
0.35%
DFR
9
0.32%
MVD
9
0.32%
MPO
8
0.28%
DET2
8
0.28%
GGPPS
8
0.28%
DXS
8
0.28%
AACT
8
0.28%
CHI
7
0.25%
F5H/CYP84A
7
0.25%
CCoAOMT
7
0.25%
CPR
7
0.25%
SQS/FDFT1
7
0.25%
LAMT
6
0.21%
HPPR
6
0.21%
ISY
5
0.18%
CYP719
4
0.14%
SQE
4
0.14%
SMO1/SMO2
4
0.14%
TDC
3
0.11%
FLS
3
0.11%
HMGR
3
0.11%
MVK
3
0.11%
MCT/IspD
3
0.11%
CYP80B1
2
0.07%
ODC
2
0.07%
TYDC_DDC
2
0.07%
DWF1
2
0.07%
FPPS
2
0.07%
DXR
2
0.07%
HDR/IspH
2
0.07%
HMGS
2
0.07%
CYP80F1
1
0.04%
XMT_MXMT_DXMT
1
0.04%
ADC
1
0.04%
FK
1
0.04%
CPI1
1
0.04%
DWF7
1
0.04%
DWF5
1
0.04%
HYD1
1
0.04%
IDI
1
0.04%
HDS/IspG
1
0.04%
PMK
1
0.04%
CMK/IspE
1
0.04%
MDS/IspF
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 325 | 19 | UGT (131) | View species results |
| Alkaloid pathway | 269 | 20 | 7DLGT (56) | View species results |
| Phenylpropanoid pathway | 255 | 11 | POD (106) | View species results |
| Flavonoid pathway | 178 | 9 | UFGT (114) | View species results |
| Rosmarinic acid pathway | 106 | 7 | C4H (42) | View species results |
| Steroid pathway | 64 | 13 | SMT1/SMT2/SMT3 (23) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 956 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 205 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Cr_09123.1|Cr_LG_4:18647365-18649038|minus| | Rosmarinic Acid | PAL | high | pass |
| Cr_09124.1|Cr_LG_4:18652614-18653024|minus| | Rosmarinic Acid | PAL | medium | pass |
| Cr_10517.1|Cr_LG_4:36401653-36405345|plus| | Rosmarinic Acid | PAL | high | pass |
| Cr_05614.1|Cr_LG_3:6155943-6157589|plus| | Rosmarinic Acid | RAS | low | borderline |
| Cr_07117.1|Cr_LG_3:30963815-30965755|plus| | Rosmarinic Acid | RAS | low | borderline |
| Cr_07458.1|Cr_LG_3:37263793-37265235|plus| | Rosmarinic Acid | RAS | medium | pass |
| Cr_07459.1|Cr_LG_3:37267112-37268624|minus| | Rosmarinic Acid | RAS | medium | pass |
| Cr_07967.1|Cr_LG_4:2681957-2685407|plus| | Rosmarinic Acid | RAS | medium | pass |
| Cr_11306.1|Cr_LG_5:1004999-1006909|plus| | Rosmarinic Acid | RAS | low | borderline |
| Cr_11357.1|Cr_LG_5:1949811-1951232|plus| | Rosmarinic Acid | RAS | low | borderline |
| Cr_12459.1|Cr_LG_5:15958990-15961521|plus| | Rosmarinic Acid | RAS | low | borderline |
| Cr_13188.1|Cr_LG_5:24782729-24783950|plus| | Rosmarinic Acid | RAS | medium | pass |
| Cr_14512.1|Cr_LG_6:4560569-4563081|minus| | Rosmarinic Acid | RAS | low | borderline |
| Cr_14708.1|Cr_LG_6:7015131-7016525|minus| | Rosmarinic Acid | RAS | low | borderline |
| Cr_14905.1|Cr_LG_6:9945679-9948115|plus| | Rosmarinic Acid | RAS | medium | pass |
| Cr_16315.1|Cr_LG_6:27927581-27929360|minus| | Rosmarinic Acid | RAS | low | borderline |
| Cr_16645.1|Cr_LG_6:32612393-32615099|minus| | Rosmarinic Acid | RAS | low | borderline |
| Cr_16723.1|Cr_LG_6:33840785-33841216|plus| | Rosmarinic Acid | RAS | medium | borderline |
| Cr_16724.1|Cr_LG_6:33847381-33848226|plus| | Rosmarinic Acid | RAS | medium | pass |
| Cr_16725.1|Cr_LG_6:33885423-33890267|plus| | Rosmarinic Acid | RAS | medium | pass |
| Cr_17367.1|Cr_LG_6:48195219-48198569|minus| | Rosmarinic Acid | RAS | low | borderline |
| Cr_17749.1|Cr_LG_6:54747317-54748720|minus| | Rosmarinic Acid | RAS | medium | pass |
| Cr_18524.1|Cr_LG_7:8580752-8584188|plus| | Rosmarinic Acid | RAS | low | borderline |
| Cr_20864.1|Cr_LG_8:4352191-4353818|plus| | Rosmarinic Acid | RAS | medium | pass |
| Cr_22073.1|Cr_LG_8:19494165-19496829|plus| | Rosmarinic Acid | RAS | low | borderline |
| Cr_23132.1|scaffold1321:57239-62112|plus| | Rosmarinic Acid | RAS | low | borderline |
| Cr_23295.1|scaffold1492:36377-36838|plus| | Rosmarinic Acid | RAS | medium | pass |
| Cr_23780.1|scaffold1888:38502-39476|plus| | Rosmarinic Acid | RAS | medium | pass |
| Cr_23812.1|scaffold1918:24237-24695|minus| | Rosmarinic Acid | RAS | medium | pass |
| Cr_24103.1|scaffold2192:13307-15943|plus| | Rosmarinic Acid | RAS | medium | pass |
| Cr_00082.1|Cr_LG_1:676054-677385|plus| | Rosmarinic Acid | TAT | medium | pass |
| Cr_11550.1|Cr_LG_5:4410262-4412943|plus| | Rosmarinic Acid | TAT | medium | pass |
| Cr_14372.1|Cr_LG_6:3037792-3039192|plus| | Rosmarinic Acid | TAT | low | borderline |
| Cr_14375.1|Cr_LG_6:3072182-3073579|minus| | Rosmarinic Acid | TAT | low | borderline |
| Cr_16907.1|Cr_LG_6:37643454-37644977|plus| | Rosmarinic Acid | TAT | low | borderline |
| Cr_17087.1|Cr_LG_6:41986499-41990210|plus| | Rosmarinic Acid | TAT | medium | pass |
| Cr_18626.1|Cr_LG_7:9951993-9953566|plus| | Rosmarinic Acid | TAT | low | borderline |
| Cr_18761.1|Cr_LG_7:12481775-12486068|plus| | Rosmarinic Acid | TAT | medium | pass |
| Cr_18903.1|Cr_LG_7:15573538-15574161|minus| | Rosmarinic Acid | TAT | low | borderline |
| Cr_18905.1|Cr_LG_7:15592888-15593535|minus| | Rosmarinic Acid | TAT | medium | pass |
| Cr_21896.1|Cr_LG_8:17126136-17130697|minus| | Rosmarinic Acid | TAT | low | borderline |