Cicer reticulatum (cicer_reticulatum)
/
Imported from atlas release summary for Cicer reticulatum.
1432
Candidate Protein Records
1197
Pathway-Level Records
2835
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
2835
Family-Level Calls
C3'H/CYP98A
5.5%
BAHD
5.47%
C4H
5.15%
4CL
4.97%
UGT
4.73%
UFGT
4.37%
7DLGT
4.34%
POD
4.06%
Other Families
61.41%
More Families (96)
IFS
98
3.46%
CYP76
94
3.32%
T3O
85
3.0%
F3H
85
3.0%
NMT
72
2.54%
DWF4/CYP90B1
62
2.19%
STR
54
1.9%
CODM/T6ODM
52
1.83%
F3'H/CYP75B
46
1.62%
H6H
45
1.59%
BR6OX2/CYP85A2
45
1.59%
SMT1/SMT2/SMT3
41
1.45%
CYP71
36
1.27%
SGD
35
1.23%
CSE
33
1.16%
PYKS
32
1.13%
TRI/TRII
31
1.09%
CAD
31
1.09%
LAC
30
1.06%
COMT
27
0.95%
RAS
27
0.95%
IFR
26
0.92%
GS
24
0.85%
IO
24
0.85%
CAS
24
0.85%
HCT
23
0.81%
PMT
20
0.71%
7DLH
19
0.67%
COR
19
0.67%
ANR
19
0.67%
CCR
19
0.67%
16OMT
18
0.63%
TPS
18
0.63%
T16H
17
0.6%
BBE
17
0.6%
GES
17
0.6%
BR6OX1/CYP85A1
17
0.6%
CYP90D1
17
0.6%
FNS
16
0.56%
SLS
15
0.53%
PAL
15
0.53%
CYP51G1
15
0.53%
F3'5'H/CYP75A
14
0.49%
NCS
13
0.46%
ROT3/CYP90C1
13
0.46%
G8O/G8H
12
0.42%
CNMT
11
0.39%
TAT
11
0.39%
CPD/CYP90A1
11
0.39%
8HGO
10
0.35%
ANS/LDOX
10
0.35%
CHS
10
0.35%
DFR
9
0.32%
MVD
9
0.32%
MPO
8
0.28%
DET2
8
0.28%
GGPPS
8
0.28%
DXS
8
0.28%
AACT
8
0.28%
CHI
7
0.25%
F5H/CYP84A
7
0.25%
CCoAOMT
7
0.25%
CPR
7
0.25%
SQS/FDFT1
7
0.25%
LAMT
6
0.21%
HPPR
6
0.21%
ISY
5
0.18%
CYP719
4
0.14%
SQE
4
0.14%
SMO1/SMO2
4
0.14%
TDC
3
0.11%
FLS
3
0.11%
HMGR
3
0.11%
MVK
3
0.11%
MCT/IspD
3
0.11%
CYP80B1
2
0.07%
ODC
2
0.07%
TYDC_DDC
2
0.07%
DWF1
2
0.07%
FPPS
2
0.07%
DXR
2
0.07%
HDR/IspH
2
0.07%
HMGS
2
0.07%
CYP80F1
1
0.04%
XMT_MXMT_DXMT
1
0.04%
ADC
1
0.04%
FK
1
0.04%
CPI1
1
0.04%
DWF7
1
0.04%
DWF5
1
0.04%
HYD1
1
0.04%
IDI
1
0.04%
HDS/IspG
1
0.04%
PMK
1
0.04%
CMK/IspE
1
0.04%
MDS/IspF
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 325 | 19 | UGT (131) | View species results |
| Alkaloid pathway | 269 | 20 | 7DLGT (56) | View species results |
| Phenylpropanoid pathway | 255 | 11 | POD (106) | View species results |
| Flavonoid pathway | 178 | 9 | UFGT (114) | View species results |
| Rosmarinic acid pathway | 106 | 7 | C4H (42) | View species results |
| Steroid pathway | 64 | 13 | SMT1/SMT2/SMT3 (23) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 956 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 205 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Cr_03162.1|Cr_LG_2:1437701-1438378|minus| | Terpenoid | GGPPS | medium | borderline |
| Cr_08855.1|Cr_LG_4:15300271-15306136|minus| | Terpenoid | GGPPS | medium | borderline |
| Cr_15958.1|Cr_LG_6:22662300-22664967|minus| | Terpenoid | GGPPS | medium | borderline |
| Cr_19697.1|Cr_LG_7:28454336-28456113|plus| | Terpenoid | GGPPS | medium | borderline |
| Cr_19792.2|Cr_LG_7:30122835-30127936|minus| | Terpenoid | GGPPS | medium | borderline |
| Cr_20461.1|Cr_LG_8:494957-496102|minus| | Terpenoid | GGPPS | medium | borderline |
| Cr_25377.1|scaffold5327:1188-1819|minus| | Terpenoid | GGPPS | low | borderline |
| Cr_15880.1|Cr_LG_6:21954342-21955107|minus| | Terpenoid | HDR/IspH | medium | pass |
| Cr_15883.1|Cr_LG_6:21962231-21965665|minus| | Terpenoid | HDR/IspH | high | pass |
| Cr_11253.2|Cr_LG_5:441909-447329|minus| | Terpenoid | HDS/IspG | high | pass |
| Cr_01219.1|Cr_LG_1:13025109-13028213|plus| | Terpenoid | HMGR | medium | pass |
| Cr_03361.1|Cr_LG_2:3561822-3565888|minus| | Terpenoid | HMGR | medium | pass |
| Cr_19354.1|Cr_LG_7:24667866-24670664|plus| | Terpenoid | HMGR | medium | pass |
| Cr_21234.1|Cr_LG_8:8328626-8333347|plus| | Terpenoid | HMGS | high | pass |
| Cr_21987.1|Cr_LG_8:18559381-18565308|plus| | Terpenoid | HMGS | high | pass |
| Cr_07080.1|Cr_LG_3:30098154-30103047|minus| | Terpenoid | IDI | medium | pass |
| Cr_16018.1|Cr_LG_6:23340497-23351277|plus| | Terpenoid | MCT/IspD | low | borderline |
| Cr_20348.1|Cr_LG_7:36227886-36232197|minus| | Terpenoid | MCT/IspD | high | pass |
| Cr_22179.1|Cr_LG_8:20512809-20517131|minus| | Terpenoid | MCT/IspD | medium | pass |
| Cr_21148.1|Cr_LG_8:7595547-7597970|minus| | Terpenoid | MDS/IspF | high | pass |
| Cr_00850.1|Cr_LG_1:9613634-9615286|plus| | Terpenoid | MVD | low | borderline |
| Cr_02277.1|Cr_LG_1:32037174-32040544|minus| | Terpenoid | MVD | low | borderline |
| Cr_10018.1|Cr_LG_4:29971971-29976560|minus| | Terpenoid | MVD | low | borderline |
| Cr_10021.1|Cr_LG_4:30008358-30014414|minus| | Terpenoid | MVD | medium | pass |
| Cr_13313.1|Cr_LG_5:27084667-27086139|minus| | Terpenoid | MVD | low | borderline |
| Cr_16697.1|Cr_LG_6:33368766-33373687|plus| | Terpenoid | MVD | low | borderline |
| Cr_22490.1|scaffold687:50635-54264|plus| | Terpenoid | MVD | low | borderline |
| Cr_23532.1|scaffold1679:13861-15571|minus| | Terpenoid | MVD | low | borderline |
| Cr_24926.1|scaffold3460:5889-7072|minus| | Terpenoid | MVD | low | borderline |
| Cr_08155.1|Cr_LG_4:5353484-5356720|plus| | Terpenoid | MVK | medium | pass |
| Cr_08409.1|Cr_LG_4:7966619-7969192|plus| | Terpenoid | MVK | low | borderline |
| Cr_20680.1|Cr_LG_8:2599448-2605933|plus| | Terpenoid | MVK | low | borderline |
| Cr_12250.1|Cr_LG_5:13770103-13775400|minus| | Terpenoid | PMK | medium | pass |
| Cr_00341.1|Cr_LG_1:3369864-3375021|plus| | Terpenoid | TPS | medium | pass |
| Cr_01678.1|Cr_LG_1:19266858-19269695|plus| | Terpenoid | TPS | medium | pass |
| Cr_02008.1|Cr_LG_1:26079503-26119070|minus| | Terpenoid | TPS | medium | pass |
| Cr_03887.1|Cr_LG_2:12068918-12072086|minus| | Terpenoid | TPS | medium | pass |
| Cr_04162.1|Cr_LG_2:18032021-18033821|minus| | Terpenoid | TPS | medium | pass |
| Cr_06011.1|Cr_LG_3:10551410-10556609|plus| | Terpenoid | TPS | medium | pass |
| Cr_10902.1|Cr_LG_4:44182604-44186099|minus| | Terpenoid | TPS | medium | pass |
| Cr_11482.1|Cr_LG_5:3772998-3777304|plus| | Terpenoid | TPS | medium | pass |
| Cr_11483.1|Cr_LG_5:3792354-3796138|plus| | Terpenoid | TPS | medium | pass |
| Cr_11484.1|Cr_LG_5:3797310-3798589|plus| | Terpenoid | TPS | medium | pass |
| Cr_15703.1|Cr_LG_6:19989313-19992912|minus| | Terpenoid | TPS | medium | pass |
| Cr_22925.1|scaffold1112:95127-96128|plus| | Terpenoid | TPS | medium | pass |
| Cr_23786.1|scaffold1891:26028-28019|plus| | Terpenoid | TPS | medium | pass |
| Cr_23989.1|scaffold2072:30350-31079|minus| | Terpenoid | TPS | medium | pass |
| Cr_23990.1|scaffold2072:27147-28205|minus| | Terpenoid | TPS | medium | pass |
| Cr_24548.1|scaffold2735:20996-21288|plus| | Terpenoid | TPS | medium | pass |
| Cr_25084.1|scaffold4027:4985-6039|plus| | Terpenoid | TPS | medium | pass |