PlantSME Plant secondary metabolism enzyme database

Clethra arborea (clethra_arborea)

Imported from atlas release summary for Clethra arborea.

1696
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 575 19 UGT (202) View species results
Alkaloid pathway 386 28 GES (64) View species results
Phenylpropanoid pathway 363 13 POD (151) View species results
Flavonoid pathway 155 13 UFGT (63) View species results
Rosmarinic acid pathway 116 7 4CL (38) View species results
Steroid pathway 101 13 CAS (65) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1496 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 305 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
Carb1040004440.1 Alkaloid GS medium pass
Carb1040004450.1 Alkaloid GS medium pass
Carb1097710009470.1 Alkaloid GS high pass
Carb1097720009480.1 Alkaloid GS high pass
Carb1370020240.1 Alkaloid GS high pass
Carb593510031620.1 Alkaloid GS high pass
Carb695510034680.1 Alkaloid GS low borderline
Carb722600035390.1 Alkaloid GS high pass
Carb819940041090.1 Alkaloid GS high pass
Carb922900067680.1 Alkaloid GS medium pass
Carb922900067690.1 Alkaloid GS medium pass
Carb929230072560.1 Alkaloid GS high pass
Carb929230072580.1 Alkaloid GS medium pass
Carb932940076340.1 Alkaloid GS medium pass
Carb932940076350.1 Alkaloid GS low borderline
Carb937160081240.1 Alkaloid GS medium pass
Carb948820099760.1 Alkaloid GS medium pass
Carb948820099770.1 Alkaloid GS high pass
Carb949050100280.1 Alkaloid GS high pass
Carb949230100870.1 Alkaloid GS medium pass
Carb952870109570.1 Alkaloid GS low borderline
Carb953090110140.1 Alkaloid GS high pass
Carb953090110150.1 Alkaloid GS high pass
Carb960670136260.1 Alkaloid GS low borderline
Carb962820144370.1 Alkaloid GS high pass
Carb964750153990.1 Alkaloid GS high pass
Carb966550164190.1 Alkaloid GS medium pass
Carb966550164200.1 Alkaloid GS high pass
Carb972280198320.1 Alkaloid GS low borderline
Carb973660206640.1 Alkaloid GS low borderline
Carb973870208370.1 Alkaloid GS high pass
Carb975520219350.1 Alkaloid GS high pass
Carb978220232910.1 Alkaloid GS low borderline
Carb979370239920.1 Alkaloid GS low borderline
Carb982070253380.1 Alkaloid GS low borderline
Carb982640256260.1 Alkaloid GS low borderline
Carb984180263750.1 Alkaloid GS low borderline
Carb984180263760.1 Alkaloid GS low borderline
Carb984350265020.1 Alkaloid GS medium pass
Carb985490271020.1 Alkaloid GS high pass
Carb988850291700.1 Alkaloid GS high pass
Carb989010292740.1 Alkaloid GS high pass
Carb989840298110.1 Alkaloid GS medium pass