PlantSME Plant secondary metabolism enzyme database

Clethra arborea (clethra_arborea)

Imported from atlas release summary for Clethra arborea.

1696
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 575 19 UGT (202) View species results
Alkaloid pathway 386 28 GES (64) View species results
Phenylpropanoid pathway 363 13 POD (151) View species results
Flavonoid pathway 155 13 UFGT (63) View species results
Rosmarinic acid pathway 116 7 4CL (38) View species results
Steroid pathway 101 13 CAS (65) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1496 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 305 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Carb988250288560.1 Flavonoid 4CL medium pass
Carb988620290610.1 Flavonoid 4CL medium pass
Carb988620290620.1 Flavonoid 4CL medium pass
Carb988760291320.1 Flavonoid 4CL medium pass
Carb989400294980.1 Flavonoid 4CL medium pass
Carb990640303350.1 Flavonoid 4CL low borderline
Carb991260307360.1 Flavonoid 4CL low borderline
Carb1330019570.1 Flavonoid ANR medium borderline
Carb1810023040.1 Flavonoid ANR medium borderline
Carb918600065260.1 Flavonoid ANR medium borderline
Carb955040115860.1 Flavonoid ANR low borderline
Carb955040115880.1 Flavonoid ANR low borderline
Carb955070116010.1 Flavonoid ANR medium borderline
Carb958760128270.1 Flavonoid ANR low borderline
Carb961700140060.1 Flavonoid ANR medium borderline
Carb962020141090.1 Flavonoid ANR medium borderline
Carb963680147920.1 Flavonoid ANR low borderline
Carb970340185710.1 Flavonoid ANR medium borderline
Carb970950190550.1 Flavonoid ANR medium borderline
Carb979300239380.1 Flavonoid ANR medium borderline
Carb979300239400.1 Flavonoid ANR low borderline
Carb979670241090.1 Flavonoid ANR medium borderline
Carb988770291330.1 Flavonoid ANR medium borderline
Carb989640297100.1 Flavonoid ANR medium borderline
Carb989640297110.1 Flavonoid ANR medium borderline
Carb989640297120.1 Flavonoid ANR medium borderline
Carb990100299410.1 Flavonoid ANR medium borderline
Carb990370301750.1 Flavonoid ANR low borderline
Carb1006280000970.1 Flavonoid ANS/LDOX low borderline
Carb1119670010520.1 Flavonoid ANS/LDOX medium borderline
Carb1123640010760.1 Flavonoid ANS/LDOX medium pass
Carb1127720010890.1 Flavonoid ANS/LDOX medium pass
Carb2080025260.1 Flavonoid ANS/LDOX medium borderline
Carb812180040460.1 Flavonoid ANS/LDOX medium borderline
Carb924430068670.1 Flavonoid ANS/LDOX medium borderline
Carb936800080780.1 Flavonoid ANS/LDOX low borderline
Carb936800080790.1 Flavonoid ANS/LDOX medium borderline
Carb945590093270.1 Flavonoid ANS/LDOX medium borderline
Carb953300110640.1 Flavonoid ANS/LDOX low borderline
Carb957760124490.1 Flavonoid ANS/LDOX medium borderline
Carb957760124500.1 Flavonoid ANS/LDOX medium borderline
Carb963160145790.1 Flavonoid ANS/LDOX medium pass
Carb968220173660.1 Flavonoid ANS/LDOX medium borderline
Carb979780241350.1 Flavonoid ANS/LDOX low borderline
Carb979850241580.1 Flavonoid ANS/LDOX medium borderline
Carb980210243360.1 Flavonoid ANS/LDOX low borderline
Carb982030253090.1 Flavonoid ANS/LDOX medium borderline
Carb985160269430.1 Flavonoid ANS/LDOX medium borderline
Carb988080287520.1 Flavonoid ANS/LDOX low borderline
Carb1196070015200.1 Flavonoid C4H medium borderline