Clethra arborea (clethra_arborea)
Imported from atlas release summary for Clethra arborea.
2216
Candidate Protein Records
1696
Pathway-Level Records
4382
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
4382
Family-Level Calls
C4H
5.89%
UGT
5.71%
BAHD
4.95%
C3'H/CYP98A
4.47%
7DLGT
4.08%
F3H
3.95%
4CL
3.9%
POD
3.88%
Other Families
63.17%
More Families (97)
CYP76
135
3.08%
IFS
133
3.04%
H6H
115
2.62%
UFGT
105
2.4%
F3'H/CYP75B
92
2.1%
CAD
92
2.1%
TPS
87
1.99%
T3O
85
1.94%
CAS
82
1.87%
NMT
81
1.85%
CODM/T6ODM
80
1.83%
DWF4/CYP90B1
80
1.83%
GES
75
1.71%
STR
69
1.57%
G8O/G8H
57
1.3%
TRI/TRII
56
1.28%
HCT
54
1.23%
T16H
53
1.21%
TAT
52
1.19%
LAC
48
1.1%
GS
43
0.98%
F3'5'H/CYP75A
43
0.98%
CSE
43
0.98%
7DLH
42
0.96%
FNS
40
0.91%
IO
39
0.89%
IFR
38
0.87%
CYP90D1
38
0.87%
CYP71
37
0.84%
SLS
36
0.82%
F5H/CYP84A
36
0.82%
BR6OX2/CYP85A2
36
0.82%
SMT1/SMT2/SMT3
36
0.82%
RAS
34
0.78%
BBE
32
0.73%
NCS
28
0.64%
COMT
27
0.62%
PYKS
24
0.55%
PMT
23
0.52%
BR6OX1/CYP85A1
22
0.5%
ANS/LDOX
21
0.48%
ANR
21
0.48%
LAMT
20
0.46%
CCR
20
0.46%
SGD
19
0.43%
CPD/CYP90A1
19
0.43%
COR
18
0.41%
CYP80B1
18
0.41%
16OMT
18
0.41%
8HGO
16
0.37%
ROT3/CYP90C1
16
0.37%
PAL
15
0.34%
CYP719
11
0.25%
HPPR
11
0.25%
MPO
10
0.23%
DFR
10
0.23%
CYP80F1
9
0.21%
CPR
9
0.21%
HMGR
9
0.21%
GGPPS
9
0.21%
AACT
9
0.21%
FPPS
8
0.18%
CHS
7
0.16%
DET2
7
0.16%
MVK
7
0.16%
6OMT_4OMT_SOMT
6
0.14%
TYDC_DDC
6
0.14%
CNMT
6
0.14%
CHI
5
0.11%
FLS
5
0.11%
CCoAOMT
5
0.11%
SQS/FDFT1
5
0.11%
SQE
5
0.11%
CYP51G1
5
0.11%
MVD
5
0.11%
ODC
4
0.09%
ISY
4
0.09%
SMO1/SMO2
4
0.09%
HDS/IspG
4
0.09%
PMK
4
0.09%
DXS
4
0.09%
XMT_MXMT_DXMT
3
0.07%
TDC
3
0.07%
IDI
3
0.07%
DWF7
2
0.05%
DWF5
2
0.05%
MCT/IspD
2
0.05%
HMGS
2
0.05%
ADC
1
0.02%
HYD1
1
0.02%
DWF1
1
0.02%
FK
1
0.02%
CPI1
1
0.02%
CMK/IspE
1
0.02%
MDS/IspF
1
0.02%
DXR
1
0.02%
HDR/IspH
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 575 | 19 | UGT (202) | View species results |
| Alkaloid pathway | 386 | 28 | GES (64) | View species results |
| Phenylpropanoid pathway | 363 | 13 | POD (151) | View species results |
| Flavonoid pathway | 155 | 13 | UFGT (63) | View species results |
| Rosmarinic acid pathway | 116 | 7 | 4CL (38) | View species results |
| Steroid pathway | 101 | 13 | CAS (65) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1496 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 305 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Carb953130110290.1 | Terpenoid | DXS | medium | pass |
| Carb954250113310.1 | Terpenoid | DXS | medium | pass |
| Carb975110216080.1 | Terpenoid | DXS | medium | pass |
| Carb977830230290.1 | Terpenoid | DXS | medium | pass |
| Carb844440044280.1 | Terpenoid | FPPS | medium | pass |
| Carb875780049790.1 | Terpenoid | FPPS | medium | borderline |
| Carb922440067340.1 | Terpenoid | FPPS | medium | borderline |
| Carb945280092670.1 | Terpenoid | FPPS | medium | pass |
| Carb946550095310.1 | Terpenoid | FPPS | low | borderline |
| Carb950530103820.1 | Terpenoid | FPPS | medium | pass |
| Carb974110210240.1 | Terpenoid | FPPS | medium | pass |
| Carb975950220880.1 | Terpenoid | FPPS | low | borderline |
| Carb2030024910.1 | Terpenoid | GGPPS | medium | borderline |
| Carb690034540.1 | Terpenoid | GGPPS | medium | borderline |
| Carb918730065340.1 | Terpenoid | GGPPS | medium | borderline |
| Carb923920068420.1 | Terpenoid | GGPPS | medium | borderline |
| Carb946620095550.1 | Terpenoid | GGPPS | medium | borderline |
| Carb950140102840.1 | Terpenoid | GGPPS | medium | borderline |
| Carb960720136430.1 | Terpenoid | GGPPS | medium | borderline |
| Carb969790182370.1 | Terpenoid | GGPPS | medium | borderline |
| Carb987530284230.1 | Terpenoid | GGPPS | medium | borderline |
| Carb984260264310.1 | Terpenoid | HDR/IspH | high | pass |
| Carb716320034980.1 | Terpenoid | HDS/IspG | medium | pass |
| Carb716400034990.1 | Terpenoid | HDS/IspG | medium | pass |
| Carb985720272330.1 | Terpenoid | HDS/IspG | high | pass |
| Carb986120274900.1 | Terpenoid | HDS/IspG | high | pass |
| Carb1083440008620.1 | Terpenoid | HMGR | medium | pass |
| Carb1083450008630.1 | Terpenoid | HMGR | medium | pass |
| Carb1113330010200.1 | Terpenoid | HMGR | medium | pass |
| Carb1113340010210.1 | Terpenoid | HMGR | medium | pass |
| Carb825210041970.1 | Terpenoid | HMGR | medium | pass |
| Carb889920053420.1 | Terpenoid | HMGR | medium | pass |
| Carb892800054110.1 | Terpenoid | HMGR | medium | pass |
| Carb892800054120.1 | Terpenoid | HMGR | medium | pass |
| Carb968320174010.1 | Terpenoid | HMGR | medium | pass |
| Carb952600108980.1 | Terpenoid | HMGS | high | pass |
| Carb974040210130.1 | Terpenoid | HMGS | high | pass |
| Carb952110107520.1 | Terpenoid | IDI | medium | pass |
| Carb952110107530.1 | Terpenoid | IDI | medium | pass |
| Carb990830304490.1 | Terpenoid | IDI | medium | pass |
| Carb938580083050.1 | Terpenoid | MCT/IspD | low | borderline |
| Carb945360092840.1 | Terpenoid | MCT/IspD | high | pass |
| Carb948600099330.1 | Terpenoid | MDS/IspF | high | pass |
| Carb721760035320.1 | Terpenoid | MVD | low | borderline |
| Carb932500076020.1 | Terpenoid | MVD | medium | pass |
| Carb967510169380.1 | Terpenoid | MVD | low | borderline |
| Carb973720207340.1 | Terpenoid | MVD | medium | pass |
| Carb974280211920.1 | Terpenoid | MVD | low | borderline |
| Carb969000177470.1 | Terpenoid | MVK | low | borderline |
| Carb973770207840.1 | Terpenoid | MVK | low | borderline |