PlantSME Plant secondary metabolism enzyme database

Coffea canephora (coffea_canephora)

Imported from atlas release summary for Coffea canephora.

2031
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 624 19 UGT (265) View species results
Alkaloid pathway 485 26 7DLGT (122) View species results
Phenylpropanoid pathway 327 12 POD (115) View species results
Flavonoid pathway 310 13 UFGT (224) View species results
Rosmarinic acid pathway 145 7 C4H (77) View species results
Steroid pathway 140 12 SMT1/SMT2/SMT3 (58) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2358 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 274 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F5H/CYP84A
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Gene Pathway Family Confidence Status
Ccane01G0002610.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccane02G0015510.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccane02G0027710.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccane02G0028860.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccane02G0029220.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccane02G0031710.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccane02G0039780.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccane03G0010190.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccane03G0011740.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccane03G0015170.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccane03G0015180.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccane04G0007000.1 Phenylpropanoid F5H/CYP84A low borderline
Ccane04G0010570.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccane04G0010580.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccane04G0010590.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccane04G0010600.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccane05G0005070.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccane06G0020950.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccane07G0009920.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccane07G0015890.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccane07G0015910.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccane07G0015940.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccane07G0015950.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccane07G0016140.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccane07G0018880.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccane08G0000660.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccane08G0006610.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccane08G0007320.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccane08G0007370.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccane08G0008410.1 Phenylpropanoid F5H/CYP84A low borderline
Ccane08G0008430.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccane08G0014880.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccane09G0000580.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccane09G0006360.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccane11G0001550.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccane11G0007730.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccane11G0014940.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccanescaffold_10920001470.1 Phenylpropanoid F5H/CYP84A medium pass
Ccanescaffold_12140003470.1 Phenylpropanoid F5H/CYP84A medium pass
Ccanescaffold_132390004830.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccanescaffold_1770008900.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccanescaffold_21950012130.1 Phenylpropanoid F5H/CYP84A medium borderline
Ccanescaffold_70990029860.1 Phenylpropanoid F5H/CYP84A medium borderline