PlantSME Plant secondary metabolism enzyme database

Coffea canephora (coffea_canephora)

Imported from atlas release summary for Coffea canephora.

2031
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 624 19 UGT (265) View species results
Alkaloid pathway 485 26 7DLGT (122) View species results
Phenylpropanoid pathway 327 12 POD (115) View species results
Flavonoid pathway 310 13 UFGT (224) View species results
Rosmarinic acid pathway 145 7 C4H (77) View species results
Steroid pathway 140 12 SMT1/SMT2/SMT3 (58) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2358 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 274 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
Reset
Gene Pathway Family Confidence Status
Ccane01G0013160.1 Steroid BR6OX1/CYP85A1 medium borderline
Ccane02G0018810.1 Steroid BR6OX1/CYP85A1 medium borderline
Ccane02G0028580.1 Steroid BR6OX1/CYP85A1 medium borderline
Ccane02G0036400.1 Steroid BR6OX1/CYP85A1 medium borderline
Ccane02G0036410.1 Steroid BR6OX1/CYP85A1 medium borderline
Ccane02G0037340.1 Steroid BR6OX1/CYP85A1 low borderline
Ccane04G0008820.1 Steroid BR6OX1/CYP85A1 medium borderline
Ccane06G0016340.1 Steroid BR6OX1/CYP85A1 medium borderline
Ccane06G0016350.1 Steroid BR6OX1/CYP85A1 medium borderline
Ccane06G0016360.1 Steroid BR6OX1/CYP85A1 medium borderline
Ccane06G0022620.1 Steroid BR6OX1/CYP85A1 medium borderline
Ccane07G0015910.1 Steroid BR6OX1/CYP85A1 low borderline
Ccane07G0018160.1 Steroid BR6OX1/CYP85A1 medium borderline
Ccane08G0005920.1 Steroid BR6OX1/CYP85A1 medium borderline
Ccane10G0003710.1 Steroid BR6OX1/CYP85A1 low borderline
Ccane10G0004140.1 Steroid BR6OX1/CYP85A1 medium borderline
Ccane11G0001750.1 Steroid BR6OX1/CYP85A1 medium borderline
Ccane11G0016380.1 Steroid BR6OX1/CYP85A1 medium borderline
Ccanescaffold_13680005380.1 Steroid BR6OX1/CYP85A1 medium borderline
Ccanescaffold_13680005390.1 Steroid BR6OX1/CYP85A1 medium borderline
Ccanescaffold_16300007780.1 Steroid BR6OX1/CYP85A1 medium borderline
Ccanescaffold_21340011630.1 Steroid BR6OX1/CYP85A1 low borderline
Ccanescaffold_45210022010.1 Steroid BR6OX1/CYP85A1 low borderline
Ccanescaffold_6230026960.1 Steroid BR6OX1/CYP85A1 medium borderline
Ccanescaffold_84640033060.1 Steroid BR6OX1/CYP85A1 medium borderline
Ccane01G0002610.1 Steroid BR6OX2/CYP85A2 low borderline
Ccane01G0003100.1 Steroid BR6OX2/CYP85A2 low borderline
Ccane01G0003760.1 Steroid BR6OX2/CYP85A2 low borderline
Ccane01G0005630.1 Steroid BR6OX2/CYP85A2 low borderline
Ccane01G0015360.1 Steroid BR6OX2/CYP85A2 low borderline
Ccane01G0015460.1 Steroid BR6OX2/CYP85A2 low borderline
Ccane01G0018610.1 Steroid BR6OX2/CYP85A2 low borderline
Ccane01G0018620.1 Steroid BR6OX2/CYP85A2 low borderline
Ccane01G0018630.1 Steroid BR6OX2/CYP85A2 low borderline
Ccane02G0005380.1 Steroid BR6OX2/CYP85A2 low borderline
Ccane02G0006570.1 Steroid BR6OX2/CYP85A2 low borderline
Ccane02G0013800.1 Steroid BR6OX2/CYP85A2 low borderline
Ccane02G0028250.1 Steroid BR6OX2/CYP85A2 low borderline
Ccane02G0031700.1 Steroid BR6OX2/CYP85A2 low borderline
Ccane02G0033940.1 Steroid BR6OX2/CYP85A2 low borderline
Ccane02G0036040.1 Steroid BR6OX2/CYP85A2 low borderline
Ccane02G0036090.1 Steroid BR6OX2/CYP85A2 low borderline
Ccane02G0036450.1 Steroid BR6OX2/CYP85A2 low borderline
Ccane02G0038150.1 Steroid BR6OX2/CYP85A2 low borderline
Ccane02G0039780.1 Steroid BR6OX2/CYP85A2 low borderline
Ccane03G0010920.1 Steroid BR6OX2/CYP85A2 low borderline
Ccane03G0010930.1 Steroid BR6OX2/CYP85A2 low borderline
Ccane03G0010940.1 Steroid BR6OX2/CYP85A2 low borderline
Ccane03G0010960.1 Steroid BR6OX2/CYP85A2 low borderline
Ccane03G0010990.1 Steroid BR6OX2/CYP85A2 low borderline