PlantSME Plant secondary metabolism enzyme database

Coffea canephora (coffea_canephora)

Imported from atlas release summary for Coffea canephora.

2347
Candidate Protein Records
2031
Pathway-Level Records
5423
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 624 19 UGT (265) View species results
Alkaloid pathway 485 26 7DLGT (122) View species results
Phenylpropanoid pathway 327 12 POD (115) View species results
Flavonoid pathway 310 13 UFGT (224) View species results
Rosmarinic acid pathway 145 7 C4H (77) View species results
Steroid pathway 140 12 SMT1/SMT2/SMT3 (58) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2358 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 274 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Protein/Isoform Record Pathway Family Confidence Status
Ccanescaffold_11800002880.1 Alkaloid T3O medium borderline
Ccanescaffold_12140003490.1 Alkaloid T3O medium borderline
Ccanescaffold_12170003530.1 Alkaloid T3O medium borderline
Ccanescaffold_13090004620.1 Alkaloid T3O low borderline
Ccanescaffold_13680005380.1 Alkaloid T3O medium borderline
Ccanescaffold_1430005880.1 Alkaloid T3O medium borderline
Ccanescaffold_1770008900.1 Alkaloid T3O medium borderline
Ccanescaffold_1770008910.1 Alkaloid T3O medium borderline
Ccanescaffold_2010010700.1 Alkaloid T3O low borderline
Ccanescaffold_21950012130.1 Alkaloid T3O medium borderline
Ccanescaffold_22790012610.1 Alkaloid T3O medium borderline
Ccanescaffold_22790012620.1 Alkaloid T3O medium borderline
Ccanescaffold_25490014400.1 Alkaloid T3O medium borderline
Ccanescaffold_25670014460.1 Alkaloid T3O medium borderline
Ccanescaffold_2570014510.1 Alkaloid T3O medium borderline
Ccanescaffold_28920016380.1 Alkaloid T3O medium borderline
Ccanescaffold_2920016700.1 Alkaloid T3O medium borderline
Ccanescaffold_2920016740.1 Alkaloid T3O medium borderline
Ccanescaffold_2920016760.1 Alkaloid T3O medium borderline
Ccanescaffold_3050017510.1 Alkaloid T3O medium pass
Ccanescaffold_3050017520.1 Alkaloid T3O medium pass
Ccanescaffold_3050017550.1 Alkaloid T3O medium pass
Ccanescaffold_3050017570.1 Alkaloid T3O medium pass
Ccanescaffold_3090017680.1 Alkaloid T3O medium borderline
Ccanescaffold_3250018090.1 Alkaloid T3O medium borderline
Ccanescaffold_3250018100.1 Alkaloid T3O medium borderline
Ccanescaffold_3850020050.1 Alkaloid T3O medium borderline
Ccanescaffold_41300020930.1 Alkaloid T3O medium borderline
Ccanescaffold_4550022080.1 Alkaloid T3O medium borderline
Ccanescaffold_4860023250.1 Alkaloid T3O medium pass
Ccanescaffold_49270023350.1 Alkaloid T3O medium borderline
Ccanescaffold_53960024750.1 Alkaloid T3O medium pass
Ccanescaffold_60770026500.1 Alkaloid T3O medium borderline
Ccanescaffold_6230026960.1 Alkaloid T3O medium pass
Ccanescaffold_6230026970.1 Alkaloid T3O medium pass
Ccanescaffold_6230026980.1 Alkaloid T3O medium pass
Ccanescaffold_6360027350.1 Alkaloid T3O medium pass
Ccanescaffold_6950029440.1 Alkaloid T3O medium borderline
Ccanescaffold_6950029450.1 Alkaloid T3O medium borderline
Ccanescaffold_70990029860.1 Alkaloid T3O medium borderline
Ccanescaffold_8110032270.1 Alkaloid T3O medium pass
Ccanescaffold_8400032960.1 Alkaloid T3O medium borderline
Ccanescaffold_8400033000.1 Alkaloid T3O medium borderline
Ccanescaffold_8840034020.1 Alkaloid T3O medium borderline