PlantSME Plant secondary metabolism enzyme database

Coffea canephora (coffea_canephora)

Imported from atlas release summary for Coffea canephora.

2347
Candidate Protein Records
2031
Pathway-Level Records
5423
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 624 19 UGT (265) View species results
Alkaloid pathway 485 26 7DLGT (122) View species results
Phenylpropanoid pathway 327 12 POD (115) View species results
Flavonoid pathway 310 13 UFGT (224) View species results
Rosmarinic acid pathway 145 7 C4H (77) View species results
Steroid pathway 140 12 SMT1/SMT2/SMT3 (58) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2358 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 274 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Ccanescaffold_46530022490.1 Flavonoid F3H low borderline
Ccanescaffold_47660022900.1 Flavonoid F3H low borderline
Ccanescaffold_5200024090.1 Flavonoid F3H low borderline
Ccanescaffold_52010024130.1 Flavonoid F3H medium borderline
Ccanescaffold_59660026340.1 Flavonoid F3H medium borderline
Ccanescaffold_66810028040.1 Flavonoid F3H medium borderline
Ccanescaffold_6760029100.1 Flavonoid F3H low borderline
Ccanescaffold_6760029110.1 Flavonoid F3H low borderline
Ccanescaffold_6760029120.1 Flavonoid F3H low borderline
Ccanescaffold_6760029130.1 Flavonoid F3H low borderline
Ccanescaffold_69130029410.1 Flavonoid F3H medium borderline
Ccanescaffold_7530030920.1 Flavonoid F3H medium borderline
Ccanescaffold_7710031330.1 Flavonoid F3H medium borderline
Ccanescaffold_7870031580.1 Flavonoid F3H low borderline
Ccanescaffold_8230032620.1 Flavonoid F3H medium borderline
Ccanescaffold_9140034550.1 Flavonoid F3H medium borderline
Ccane01G0007290.1 Flavonoid FLS medium borderline
Ccane04G0011060.1 Flavonoid FLS medium borderline
Ccane06G0004490.1 Flavonoid FLS low borderline
Ccane07G0011780.1 Flavonoid FLS low borderline
Ccane07G0013780.1 Flavonoid FLS low borderline
Ccane08G0002150.1 Flavonoid FLS medium borderline
Ccane02G0015760.1 Flavonoid FNS medium borderline
Ccane02G0037340.1 Flavonoid FNS medium borderline
Ccane03G0010950.1 Flavonoid FNS medium borderline
Ccane03G0010980.1 Flavonoid FNS low borderline
Ccane03G0015170.1 Flavonoid FNS medium borderline
Ccane04G0001740.1 Flavonoid FNS low borderline
Ccane04G0010570.1 Flavonoid FNS medium borderline
Ccane04G0010590.1 Flavonoid FNS medium borderline
Ccane04G0011260.1 Flavonoid FNS medium borderline
Ccane08G0000660.1 Flavonoid FNS medium borderline
Ccane08G0007390.1 Flavonoid FNS medium borderline
Ccane08G0008410.1 Flavonoid FNS low borderline
Ccane08G0010820.1 Flavonoid FNS medium borderline
Ccane09G0003290.1 Flavonoid FNS medium borderline
Ccane10G0005240.1 Flavonoid FNS medium borderline
Ccane10G0005250.1 Flavonoid FNS medium borderline
Ccane11G0006200.1 Flavonoid FNS medium borderline
Ccane11G0014940.1 Flavonoid FNS medium borderline
Ccanescaffold_27290015600.1 Flavonoid FNS medium borderline
Ccanescaffold_28920016380.1 Flavonoid FNS medium borderline
Ccanescaffold_6950029440.1 Flavonoid FNS medium borderline
Ccanescaffold_8110032270.1 Flavonoid FNS medium borderline
Ccane01G0003970.1 Flavonoid IFR high pass
Ccane01G0003990.1 Flavonoid IFR high pass
Ccane01G0004010.1 Flavonoid IFR medium pass
Ccane01G0005880.1 Flavonoid IFR low borderline
Ccane01G0017740.1 Flavonoid IFR low borderline
Ccane02G0008080.1 Flavonoid IFR low borderline