PlantSME Plant secondary metabolism enzyme database

Coffea canephora (coffea_canephora)

Imported from atlas release summary for Coffea canephora.

2347
Candidate Protein Records
2031
Pathway-Level Records
5423
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 624 19 UGT (265) View species results
Alkaloid pathway 485 26 7DLGT (122) View species results
Phenylpropanoid pathway 327 12 POD (115) View species results
Flavonoid pathway 310 13 UFGT (224) View species results
Rosmarinic acid pathway 145 7 C4H (77) View species results
Steroid pathway 140 12 SMT1/SMT2/SMT3 (58) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2358 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 274 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Ccane05G0001740.1 Alkaloid G8O/G8H medium borderline
Ccane06G0005060.1 Alkaloid G8O/G8H medium borderline
Ccane06G0022090.1 Alkaloid G8O/G8H medium borderline
Ccane06G0022450.1 Alkaloid G8O/G8H low borderline
Ccane06G0022460.1 Alkaloid G8O/G8H medium borderline
Ccane06G0022470.1 Alkaloid G8O/G8H medium borderline
Ccane07G0015890.1 Alkaloid G8O/G8H medium pass
Ccane07G0015910.1 Alkaloid G8O/G8H low borderline
Ccane07G0015940.1 Alkaloid G8O/G8H medium borderline
Ccane07G0016970.1 Alkaloid G8O/G8H medium borderline
Ccane07G0018880.1 Alkaloid G8O/G8H medium borderline
Ccane08G0006630.1 Alkaloid G8O/G8H medium borderline
Ccane08G0006640.1 Alkaloid G8O/G8H low borderline
Ccane08G0006970.1 Alkaloid G8O/G8H medium borderline
Ccane08G0008060.1 Alkaloid G8O/G8H medium borderline
Ccane08G0008080.1 Alkaloid G8O/G8H medium borderline
Ccane08G0008430.1 Alkaloid G8O/G8H medium borderline
Ccane08G0013600.1 Alkaloid G8O/G8H medium borderline
Ccane09G0005150.1 Alkaloid G8O/G8H medium borderline
Ccane10G0005340.1 Alkaloid G8O/G8H medium borderline
Ccane10G0005360.1 Alkaloid G8O/G8H medium borderline
Ccane10G0005380.1 Alkaloid G8O/G8H medium borderline
Ccane10G0005390.1 Alkaloid G8O/G8H medium borderline
Ccane10G0005400.1 Alkaloid G8O/G8H medium borderline
Ccane11G0007620.1 Alkaloid G8O/G8H medium borderline
Ccanescaffold_11670002740.1 Alkaloid G8O/G8H medium borderline
Ccanescaffold_12140003500.1 Alkaloid G8O/G8H low borderline
Ccanescaffold_18660009550.1 Alkaloid G8O/G8H medium borderline
Ccanescaffold_2360013250.1 Alkaloid G8O/G8H medium borderline
Ccanescaffold_2360013260.1 Alkaloid G8O/G8H medium borderline
Ccanescaffold_27290015600.1 Alkaloid G8O/G8H low borderline
Ccanescaffold_54870025130.1 Alkaloid G8O/G8H medium borderline
Ccanescaffold_60110026440.1 Alkaloid G8O/G8H medium borderline
Ccanescaffold_670028360.1 Alkaloid G8O/G8H medium borderline
Ccane01G0019400.1 Alkaloid GES low borderline
Ccane02G0011820.1 Alkaloid GES medium pass
Ccane02G0011830.1 Alkaloid GES medium pass
Ccane02G0011870.1 Alkaloid GES medium pass
Ccane02G0012790.1 Alkaloid GES medium pass
Ccane02G0012800.1 Alkaloid GES medium pass
Ccane02G0020930.1 Alkaloid GES medium pass
Ccane02G0029490.1 Alkaloid GES medium pass
Ccane02G0029500.1 Alkaloid GES medium pass
Ccane02G0029590.1 Alkaloid GES medium pass
Ccane02G0035640.1 Alkaloid GES medium pass
Ccane02G0037940.1 Alkaloid GES low borderline
Ccane03G0014100.1 Alkaloid GES medium pass
Ccane04G0011690.1 Alkaloid GES low borderline
Ccane04G0016350.1 Alkaloid GES medium pass
Ccane04G0016380.1 Alkaloid GES medium pass