PlantSME Plant secondary metabolism enzyme database

Coffea canephora (coffea_canephora)

Imported from atlas release summary for Coffea canephora.

2347
Candidate Protein Records
2031
Pathway-Level Records
5423
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 624 19 UGT (265) View species results
Alkaloid pathway 485 26 7DLGT (122) View species results
Phenylpropanoid pathway 327 12 POD (115) View species results
Flavonoid pathway 310 13 UFGT (224) View species results
Rosmarinic acid pathway 145 7 C4H (77) View species results
Steroid pathway 140 12 SMT1/SMT2/SMT3 (58) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2358 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 274 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Ccanescaffold_2800015970.1 Alkaloid IO medium borderline
Ccanescaffold_34980019100.1 Alkaloid IO medium borderline
Ccanescaffold_45210022010.1 Alkaloid IO medium borderline
Ccanescaffold_6310027260.1 Alkaloid IO low borderline
Ccane02G0019570.1 Alkaloid ISY high pass
Ccane10G0005500.1 Alkaloid ISY medium pass
Ccane10G0005510.1 Alkaloid ISY high pass
Ccane01G0000460.1 Alkaloid LAMT medium borderline
Ccane01G0000720.1 Alkaloid LAMT medium borderline
Ccane01G0001590.1 Alkaloid LAMT medium borderline
Ccane01G0002900.1 Alkaloid LAMT medium borderline
Ccane01G0003110.1 Alkaloid LAMT medium borderline
Ccane02G0009350.1 Alkaloid LAMT medium borderline
Ccane03G0007330.1 Alkaloid LAMT medium borderline
Ccane03G0010210.1 Alkaloid LAMT medium borderline
Ccane04G0006680.1 Alkaloid LAMT medium borderline
Ccane05G0014330.1 Alkaloid LAMT medium borderline
Ccane07G0008390.1 Alkaloid LAMT medium borderline
Ccane07G0009900.1 Alkaloid LAMT medium borderline
Ccane07G0018720.1 Alkaloid LAMT medium pass
Ccane07G0018730.1 Alkaloid LAMT medium borderline
Ccane07G0018740.1 Alkaloid LAMT medium borderline
Ccane08G0011680.1 Alkaloid LAMT medium borderline
Ccane09G0006950.1 Alkaloid LAMT medium borderline
Ccane09G0006960.1 Alkaloid LAMT medium borderline
Ccane09G0006970.1 Alkaloid LAMT medium borderline
Ccane09G0007000.1 Alkaloid LAMT medium borderline
Ccane11G0006930.1 Alkaloid LAMT low borderline
Ccane11G0007650.1 Alkaloid LAMT medium borderline
Ccane11G0009140.1 Alkaloid LAMT medium pass
Ccanescaffold_29610016890.1 Alkaloid LAMT medium borderline
Ccanescaffold_35800019410.1 Alkaloid LAMT medium borderline
Ccanescaffold_4360021510.1 Alkaloid LAMT low borderline
Ccanescaffold_43700021520.1 Alkaloid LAMT medium borderline
Ccanescaffold_4510021920.1 Alkaloid LAMT medium borderline
Ccanescaffold_8330032810.1 Alkaloid LAMT medium borderline
Ccanescaffold_8430033040.1 Alkaloid LAMT medium borderline
Ccane03G0003650.1 Alkaloid MPO medium pass
Ccane03G0003660.1 Alkaloid MPO medium pass
Ccane03G0003670.1 Alkaloid MPO medium pass
Ccane04G0011740.1 Alkaloid MPO medium pass
Ccane08G0013160.1 Alkaloid MPO low borderline
Ccane08G0013170.1 Alkaloid MPO low borderline
Ccane11G0015620.1 Alkaloid MPO medium pass
Ccane11G0015630.1 Alkaloid MPO medium pass
Ccanescaffold_59980026420.1 Alkaloid MPO medium pass
Ccane01G0001380.1 Alkaloid NCS low borderline
Ccane03G0004460.1 Alkaloid NCS low borderline
Ccane03G0007360.1 Alkaloid NCS medium pass
Ccane03G0010070.1 Alkaloid NCS low borderline