PlantSME Plant secondary metabolism enzyme database

Coffea canephora (coffea_canephora)

Imported from atlas release summary for Coffea canephora.

2031
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 624 19 UGT (265) View species results
Alkaloid pathway 485 26 7DLGT (122) View species results
Phenylpropanoid pathway 327 12 POD (115) View species results
Flavonoid pathway 310 13 UFGT (224) View species results
Rosmarinic acid pathway 145 7 C4H (77) View species results
Steroid pathway 140 12 SMT1/SMT2/SMT3 (58) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2358 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 274 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Ccane02G0028500.1 Flavonoid ANR medium borderline
Ccane02G0029030.1 Flavonoid ANR medium borderline
Ccane02G0029040.1 Flavonoid ANR medium borderline
Ccane02G0029050.1 Flavonoid ANR medium borderline
Ccane02G0029060.1 Flavonoid ANR low borderline
Ccane02G0029090.1 Flavonoid ANR medium borderline
Ccane02G0039110.1 Flavonoid ANR medium pass
Ccane03G0010730.1 Flavonoid ANR low borderline
Ccane04G0005040.1 Flavonoid ANR medium borderline
Ccane05G0013110.1 Flavonoid ANR medium borderline
Ccane06G0014390.1 Flavonoid ANR low borderline
Ccane07G0002110.1 Flavonoid ANR low borderline
Ccane07G0004970.1 Flavonoid ANR low borderline
Ccane07G0009810.1 Flavonoid ANR medium borderline
Ccane10G0004290.1 Flavonoid ANR low borderline
Ccane11G0010200.1 Flavonoid ANR medium borderline
Ccanescaffold_3000017150.1 Flavonoid ANR medium borderline
Ccanescaffold_3000017170.1 Flavonoid ANR medium borderline
Ccanescaffold_3000017190.1 Flavonoid ANR medium borderline
Ccanescaffold_3000017200.1 Flavonoid ANR medium borderline
Ccanescaffold_3000017210.1 Flavonoid ANR medium borderline
Ccanescaffold_3000017220.1 Flavonoid ANR medium borderline
Ccanescaffold_7740031380.1 Flavonoid ANR medium borderline
Ccane01G0002670.1 Flavonoid ANS/LDOX medium borderline
Ccane01G0007270.1 Flavonoid ANS/LDOX medium pass
Ccane03G0005110.1 Flavonoid ANS/LDOX medium borderline
Ccane03G0005230.1 Flavonoid ANS/LDOX medium borderline
Ccane03G0008780.1 Flavonoid ANS/LDOX medium borderline
Ccane03G0011920.1 Flavonoid ANS/LDOX medium borderline
Ccane04G0016900.1 Flavonoid ANS/LDOX low borderline
Ccane05G0002920.1 Flavonoid ANS/LDOX medium pass
Ccane06G0007730.1 Flavonoid ANS/LDOX medium borderline
Ccane09G0007540.1 Flavonoid ANS/LDOX medium borderline
Ccane11G0001630.1 Flavonoid ANS/LDOX medium borderline
Ccanescaffold_113570002250.1 Flavonoid ANS/LDOX medium borderline
Ccanescaffold_1910010130.1 Flavonoid ANS/LDOX medium borderline
Ccanescaffold_19740010550.1 Flavonoid ANS/LDOX medium pass
Ccanescaffold_2680015240.1 Flavonoid ANS/LDOX medium borderline
Ccanescaffold_2680015250.1 Flavonoid ANS/LDOX medium pass
Ccanescaffold_26960015350.1 Flavonoid ANS/LDOX medium borderline
Ccanescaffold_29620016900.1 Flavonoid ANS/LDOX medium borderline
Ccanescaffold_5040023540.1 Flavonoid ANS/LDOX medium borderline
Ccanescaffold_6130026630.1 Flavonoid ANS/LDOX medium borderline
Ccanescaffold_77610031420.1 Flavonoid ANS/LDOX medium borderline
Ccanescaffold_9180034600.1 Flavonoid ANS/LDOX medium borderline
Ccane02G0010080.1 Flavonoid C4H medium borderline
Ccane06G0004990.1 Flavonoid C4H low borderline
Ccanescaffold_4550022090.1 Flavonoid C4H low borderline
Ccanescaffold_5110023760.1 Flavonoid C4H medium borderline
Ccane02G0005390.1 Flavonoid CHI medium pass