PlantSME Plant secondary metabolism enzyme database

Coffea canephora (coffea_canephora)

Imported from atlas release summary for Coffea canephora.

2347
Candidate Protein Records
2031
Pathway-Level Records
5423
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 624 19 UGT (265) View species results
Alkaloid pathway 485 26 7DLGT (122) View species results
Phenylpropanoid pathway 327 12 POD (115) View species results
Flavonoid pathway 310 13 UFGT (224) View species results
Rosmarinic acid pathway 145 7 C4H (77) View species results
Steroid pathway 140 12 SMT1/SMT2/SMT3 (58) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2358 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 274 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Ccane02G0026440.1 Alkaloid T3O low borderline
Ccane02G0027710.1 Alkaloid T3O medium borderline
Ccane02G0028250.1 Alkaloid T3O medium borderline
Ccane02G0028580.1 Alkaloid T3O medium borderline
Ccane02G0028870.1 Alkaloid T3O medium borderline
Ccane02G0029230.1 Alkaloid T3O medium borderline
Ccane02G0033940.1 Alkaloid T3O medium borderline
Ccane02G0036040.1 Alkaloid T3O medium borderline
Ccane02G0036090.1 Alkaloid T3O medium borderline
Ccane02G0036410.1 Alkaloid T3O medium borderline
Ccane03G0007970.1 Alkaloid T3O medium borderline
Ccane03G0010910.1 Alkaloid T3O medium borderline
Ccane03G0010920.1 Alkaloid T3O medium borderline
Ccane03G0010930.1 Alkaloid T3O medium borderline
Ccane03G0010940.1 Alkaloid T3O medium borderline
Ccane03G0010960.1 Alkaloid T3O medium borderline
Ccane03G0010990.1 Alkaloid T3O medium borderline
Ccane03G0014110.1 Alkaloid T3O medium borderline
Ccane04G0001230.1 Alkaloid T3O medium borderline
Ccane04G0002020.1 Alkaloid T3O medium pass
Ccane04G0008820.1 Alkaloid T3O medium pass
Ccane04G0010040.1 Alkaloid T3O low borderline
Ccane04G0011200.1 Alkaloid T3O medium borderline
Ccane04G0011210.1 Alkaloid T3O medium borderline
Ccane04G0011250.1 Alkaloid T3O medium borderline
Ccane04G0011300.1 Alkaloid T3O medium borderline
Ccane04G0012670.1 Alkaloid T3O medium borderline
Ccane04G0013260.1 Alkaloid T3O medium borderline
Ccane05G0000020.1 Alkaloid T3O medium pass
Ccane05G0000380.1 Alkaloid T3O low borderline
Ccane05G0000560.1 Alkaloid T3O medium borderline
Ccane05G0003800.1 Alkaloid T3O low borderline
Ccane05G0004010.1 Alkaloid T3O medium borderline
Ccane05G0004020.1 Alkaloid T3O medium borderline
Ccane05G0004040.1 Alkaloid T3O medium borderline
Ccane05G0005080.1 Alkaloid T3O medium borderline
Ccane05G0005090.1 Alkaloid T3O medium borderline
Ccane05G0005100.1 Alkaloid T3O medium borderline
Ccane05G0005110.1 Alkaloid T3O medium borderline
Ccane05G0009790.1 Alkaloid T3O medium pass
Ccane05G0014770.1 Alkaloid T3O medium borderline
Ccane06G0005540.1 Alkaloid T3O medium pass
Ccane06G0016340.1 Alkaloid T3O medium borderline
Ccane06G0020240.1 Alkaloid T3O low borderline
Ccane06G0020390.1 Alkaloid T3O medium borderline
Ccane06G0022050.1 Alkaloid T3O medium borderline
Ccane06G0022070.1 Alkaloid T3O medium borderline
Ccane06G0022080.1 Alkaloid T3O medium borderline
Ccane06G0022120.1 Alkaloid T3O medium borderline
Ccane06G0023770.1 Alkaloid T3O medium pass