PlantSME Plant secondary metabolism enzyme database

Coffea canephora (coffea_canephora)

Imported from atlas release summary for Coffea canephora.

2031
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 624 19 UGT (265) View species results
Alkaloid pathway 485 26 7DLGT (122) View species results
Phenylpropanoid pathway 327 12 POD (115) View species results
Flavonoid pathway 310 13 UFGT (224) View species results
Rosmarinic acid pathway 145 7 C4H (77) View species results
Steroid pathway 140 12 SMT1/SMT2/SMT3 (58) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2358 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 274 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
Ccanescaffold_2430013660.1 Terpenoid BAHD medium pass
Ccanescaffold_2450013800.1 Terpenoid BAHD medium pass
Ccanescaffold_2900016540.1 Terpenoid BAHD medium pass
Ccanescaffold_2920016670.1 Terpenoid BAHD medium pass
Ccanescaffold_3830019970.1 Terpenoid BAHD medium pass
Ccanescaffold_42020021140.1 Terpenoid BAHD low borderline
Ccanescaffold_6320027310.1 Terpenoid BAHD low borderline
Ccanescaffold_65410027690.1 Terpenoid BAHD medium pass
Ccanescaffold_66570028020.1 Terpenoid BAHD medium pass
Ccanescaffold_67990029210.1 Terpenoid BAHD low borderline
Ccanescaffold_7100029870.1 Terpenoid BAHD medium pass
Ccanescaffold_7400030630.1 Terpenoid BAHD low borderline
Ccanescaffold_78940031660.1 Terpenoid BAHD medium pass
Ccanescaffold_7960031790.1 Terpenoid BAHD medium pass
Ccanescaffold_8060032120.1 Terpenoid BAHD medium pass
Ccanescaffold_8060032130.1 Terpenoid BAHD medium pass
Ccanescaffold_86240033420.1 Terpenoid BAHD medium pass
Ccanescaffold_9260034800.1 Terpenoid BAHD medium pass
Ccane01G0007140.1 Terpenoid CMK/IspE high pass
Ccane01G0018050.1 Terpenoid CMK/IspE low borderline
Ccane05G0002880.1 Terpenoid CMK/IspE low borderline
Ccane01G0002610.1 Terpenoid CYP71 medium borderline
Ccane01G0005620.1 Terpenoid CYP71 medium borderline
Ccane01G0005630.1 Terpenoid CYP71 medium borderline
Ccane01G0009550.1 Terpenoid CYP71 medium pass
Ccane01G0014220.1 Terpenoid CYP71 medium pass
Ccane01G0018960.1 Terpenoid CYP71 low borderline
Ccane01G0021560.1 Terpenoid CYP71 medium pass
Ccane02G0006560.1 Terpenoid CYP71 medium pass
Ccane02G0009030.1 Terpenoid CYP71 medium pass
Ccane02G0016330.1 Terpenoid CYP71 medium pass
Ccane02G0018500.1 Terpenoid CYP71 low borderline
Ccane02G0028250.1 Terpenoid CYP71 medium borderline
Ccane02G0033670.1 Terpenoid CYP71 medium pass
Ccane02G0036530.1 Terpenoid CYP71 medium pass
Ccane03G0010930.1 Terpenoid CYP71 medium borderline
Ccane03G0010940.1 Terpenoid CYP71 medium borderline
Ccane03G0010960.1 Terpenoid CYP71 medium borderline
Ccane03G0010990.1 Terpenoid CYP71 medium borderline
Ccane03G0014110.1 Terpenoid CYP71 medium borderline
Ccane03G0015150.1 Terpenoid CYP71 medium borderline
Ccane03G0015170.1 Terpenoid CYP71 low borderline
Ccane04G0010570.1 Terpenoid CYP71 low borderline
Ccane04G0011190.1 Terpenoid CYP71 medium borderline
Ccane04G0011200.1 Terpenoid CYP71 medium borderline
Ccane04G0011250.1 Terpenoid CYP71 medium borderline
Ccane04G0011270.1 Terpenoid CYP71 medium borderline
Ccane05G0000020.1 Terpenoid CYP71 low borderline
Ccane05G0004010.1 Terpenoid CYP71 medium borderline
Ccane05G0004020.1 Terpenoid CYP71 medium borderline