PlantSME Plant secondary metabolism enzyme database

Coffea canephora (coffea_canephora)

Imported from atlas release summary for Coffea canephora.

2347
Candidate Protein Records
2031
Pathway-Level Records
5423
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 624 19 UGT (265) View species results
Alkaloid pathway 485 26 7DLGT (122) View species results
Phenylpropanoid pathway 327 12 POD (115) View species results
Flavonoid pathway 310 13 UFGT (224) View species results
Rosmarinic acid pathway 145 7 C4H (77) View species results
Steroid pathway 140 12 SMT1/SMT2/SMT3 (58) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2358 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 274 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Ccane09G0007390.1 Alkaloid BBE medium borderline
Ccane09G0007410.1 Alkaloid BBE medium borderline
Ccane09G0007420.1 Alkaloid BBE medium borderline
Ccane09G0007430.1 Alkaloid BBE medium borderline
Ccane09G0007440.1 Alkaloid BBE medium borderline
Ccane09G0007450.1 Alkaloid BBE medium borderline
Ccane09G0007460.1 Alkaloid BBE medium borderline
Ccane09G0007470.1 Alkaloid BBE medium borderline
Ccane09G0007480.1 Alkaloid BBE medium borderline
Ccane09G0007490.1 Alkaloid BBE medium borderline
Ccane10G0000960.1 Alkaloid BBE medium borderline
Ccane10G0000970.1 Alkaloid BBE medium borderline
Ccane10G0012270.1 Alkaloid BBE medium borderline
Ccane10G0016040.1 Alkaloid BBE medium borderline
Ccane11G0001320.1 Alkaloid BBE medium borderline
Ccanescaffold_20140010760.1 Alkaloid BBE medium borderline
Ccanescaffold_20140010770.1 Alkaloid BBE medium borderline
Ccanescaffold_20140010780.1 Alkaloid BBE medium borderline
Ccanescaffold_27770015760.1 Alkaloid BBE medium borderline
Ccanescaffold_52200024250.1 Alkaloid BBE medium borderline
Ccanescaffold_52200024260.1 Alkaloid BBE medium borderline
Ccane02G0009060.1 Alkaloid CNMT low borderline
Ccane03G0005980.1 Alkaloid CNMT medium pass
Ccane05G0009170.1 Alkaloid CNMT low borderline
Ccane06G0010050.1 Alkaloid CNMT low borderline
Ccane07G0008360.1 Alkaloid CNMT low borderline
Ccane08G0011040.1 Alkaloid CNMT medium borderline
Ccane09G0009670.1 Alkaloid CNMT low borderline
Ccanescaffold_92250034700.1 Alkaloid CNMT low borderline
Ccanescaffold_92440034730.1 Alkaloid CNMT medium borderline
Ccane01G0002680.1 Alkaloid CODM/T6ODM medium borderline
Ccane01G0002690.1 Alkaloid CODM/T6ODM medium borderline
Ccane01G0004340.1 Alkaloid CODM/T6ODM medium borderline
Ccane01G0007240.1 Alkaloid CODM/T6ODM medium borderline
Ccane01G0007250.1 Alkaloid CODM/T6ODM medium borderline
Ccane01G0007290.1 Alkaloid CODM/T6ODM medium borderline
Ccane01G0014380.1 Alkaloid CODM/T6ODM medium borderline
Ccane01G0018490.1 Alkaloid CODM/T6ODM medium borderline
Ccane02G0000770.1 Alkaloid CODM/T6ODM medium borderline
Ccane02G0002740.1 Alkaloid CODM/T6ODM medium borderline
Ccane02G0003620.1 Alkaloid CODM/T6ODM medium borderline
Ccane02G0006430.1 Alkaloid CODM/T6ODM medium borderline
Ccane02G0010540.1 Alkaloid CODM/T6ODM medium borderline
Ccane02G0018330.1 Alkaloid CODM/T6ODM medium borderline
Ccane02G0019970.1 Alkaloid CODM/T6ODM medium borderline
Ccane02G0021110.1 Alkaloid CODM/T6ODM medium borderline
Ccane02G0032820.1 Alkaloid CODM/T6ODM medium borderline
Ccane02G0037350.1 Alkaloid CODM/T6ODM medium borderline
Ccane03G0005220.1 Alkaloid CODM/T6ODM medium borderline
Ccane03G0005230.1 Alkaloid CODM/T6ODM medium borderline