PlantSME Plant secondary metabolism enzyme database

Corydalis tomentella (corydalis_tomentella)

Imported from atlas release summary for Corydalis tomentella.

1121
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 28.81% Phenylpropanoid pathway 22.03% Alkaloid pathway 21.5% Flavonoid pathway 12.58% Rosmarinic acid pathway 9.19% Steroid pathway 5.89%
Family Distribution
C4H 6.77% C3'H/CYP98A 6.51% BAHD 5.71% IFS 4.14% POD 4.01% T3O 3.56% UGT 3.56% CYP76 3.5%
Other Families 62.24%
More Families (96)
7DLGT 99 3.18% UFGT 99 3.18% DWF4/CYP90B1 89 2.86% 4CL 87 2.79% F3H 84 2.69% BR6OX2/CYP85A2 71 2.28% F3'H/CYP75B 70 2.25% CYP71 63 2.02% NMT 59 1.89% H6H 52 1.67% T16H 46 1.48% STR 45 1.44% CODM/T6ODM 41 1.32% IFR 40 1.28% CAD 39 1.25% HCT 36 1.15% SMT1/SMT2/SMT3 36 1.15% BBE 33 1.06% CYP90D1 32 1.03% ROT3/CYP90C1 31 0.99% CAS 31 0.99% CSE 29 0.93% 7DLH 28 0.9% CNMT 25 0.8% TRI/TRII 25 0.8% IO 24 0.77% F3'5'H/CYP75A 24 0.77% LAC 24 0.77% PYKS 23 0.74% COMT 23 0.74% RAS 22 0.71% NCS 21 0.67% G8O/G8H 20 0.64% GS 20 0.64% TAT 20 0.64% TPS 20 0.64% GES 19 0.61% 16OMT 19 0.61% FNS 18 0.58% ANR 18 0.58% CCR 18 0.58% F5H/CYP84A 18 0.58% COR 16 0.51% SGD 16 0.51% ANS/LDOX 15 0.48% PMT 13 0.42% SLS 13 0.42% CPD/CYP90A1 13 0.42% 8HGO 12 0.38% PAL 12 0.38% LAMT 10 0.32% MVK 10 0.32% MPO 9 0.29% DFR 9 0.29% CPR 8 0.26% CYP51G1 8 0.26% AACT 8 0.26% CYP719 7 0.22% BR6OX1/CYP85A1 7 0.22% GGPPS 7 0.22% CCoAOMT 6 0.19% FPPS 6 0.19% CYP80B1 5 0.16% CHI 5 0.16% HPPR 5 0.16% SMO1/SMO2 5 0.16% SQS/FDFT1 5 0.16% DXS 5 0.16% TYDC_DDC 4 0.13% FLS 4 0.13% DET2 4 0.13% FK 4 0.13% HMGR 4 0.13% ISY 3 0.1% TDC 3 0.1% CHS 3 0.1% MCT/IspD 3 0.1% MVD 3 0.1% 6OMT_4OMT_SOMT 2 0.06% XMT_MXMT_DXMT 2 0.06% ODC 2 0.06% SQE 2 0.06% DWF7 2 0.06% HYD1 2 0.06% DWF1 2 0.06% PMK 2 0.06% DXR 2 0.06% IDI 2 0.06% HMGS 2 0.06% ADC 1 0.03% CPI1 1 0.03% DWF5 1 0.03% MDS/IspF 1 0.03% CMK/IspE 1 0.03% HDR/IspH 1 0.03% HDS/IspG 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 323 19 BAHD (124) View species results
Phenylpropanoid pathway 247 12 POD (110) View species results
Alkaloid pathway 241 21 7DLGT (47) View species results
Flavonoid pathway 141 10 UFGT (92) View species results
Rosmarinic acid pathway 103 7 C4H (42) View species results
Steroid pathway 66 11 CAS (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1332 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 236 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
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Gene Pathway Family Confidence Status Best Target
GWHPAORS001514 Terpenoid BAHD medium pass BAHD__00048__sp_Q5M757_ZDH15_ARATH
GWHPAORS002381 Terpenoid BAHD medium pass BAHD__00015__sp_D2Y3X2_PUN1_CAPAN
GWHPAORS003243 Terpenoid BAHD medium pass BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN
GWHPAORS003822 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
GWHPAORS003887 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
GWHPAORS003942 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
GWHPAORS004126 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
GWHPAORS004127 Terpenoid BAHD medium pass BAHD__00015__sp_D2Y3X2_PUN1_CAPAN
GWHPAORS004128 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
GWHPAORS004828 Terpenoid BAHD medium pass BAHD__00068__sp_Q9C533_ZDHC1_ARATH
GWHPAORS004940 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
GWHPAORS005428 Terpenoid BAHD medium pass BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN
GWHPAORS005737 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
GWHPAORS005864 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
GWHPAORS005939 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
GWHPAORS005973 Terpenoid BAHD low borderline BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
GWHPAORS005974 Terpenoid BAHD low borderline BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
GWHPAORS006048 Terpenoid BAHD medium pass BAHD__00071__sp_Q9CAY3_GPAT5_ARATH
GWHPAORS006202 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
GWHPAORS006284 Terpenoid BAHD low borderline BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
GWHPAORS006329 Terpenoid BAHD medium pass BAHD__00002__sp_A0A068BIF1_AT9_ACTER
GWHPAORS007149 Terpenoid BAHD low borderline BAHD__00066__sp_Q94CK0_WSD7_ARATH
GWHPAORS007167 Terpenoid BAHD low borderline BAHD__00066__sp_Q94CK0_WSD7_ARATH
GWHPAORS007168 Terpenoid BAHD low borderline BAHD__00066__sp_Q94CK0_WSD7_ARATH
GWHPAORS007169 Terpenoid BAHD low borderline BAHD__00066__sp_Q94CK0_WSD7_ARATH
GWHPAORS007263 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
GWHPAORS007266 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
GWHPAORS007268 Terpenoid BAHD low borderline BAHD__00073__sp_Q9FF86_DCR_ARATH
GWHPAORS007271 Terpenoid BAHD low borderline BAHD__00081__sp_Q9LJB4_5MAT_ARATH
GWHPAORS007272 Terpenoid BAHD low borderline BAHD__00073__sp_Q9FF86_DCR_ARATH
GWHPAORS007273 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
GWHPAORS007314 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
GWHPAORS007557 Terpenoid BAHD medium pass BAHD__00021__sp_K7K424_DAT2D_SOYBN
GWHPAORS007603 Terpenoid BAHD medium pass BAHD__00097__sp_Q9ZV87_NAPES_ARATH
GWHPAORS007734 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
GWHPAORS007736 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
GWHPAORS007737 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
GWHPAORS009152 Terpenoid BAHD low borderline BAHD__00050__sp_Q6DR03_ZDHC3_ARATH
GWHPAORS010078 Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
GWHPAORS010390 Terpenoid BAHD medium pass BAHD__00038__sp_Q3EC11_ZDHC2_ARATH
GWHPAORS010391 Terpenoid BAHD medium pass BAHD__00038__sp_Q3EC11_ZDHC2_ARATH
GWHPAORS010690 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
GWHPAORS010694 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
GWHPAORS010695 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
GWHPAORS010699 Terpenoid BAHD medium pass BAHD__00089__sp_Q9SB58_ZDH19_ARATH
GWHPAORS010955 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
GWHPAORS011001 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
GWHPAORS011013 Terpenoid BAHD medium pass BAHD__00074__sp_Q9FFQ7_FACT_ARATH
GWHPAORS011152 Terpenoid BAHD medium pass BAHD__00033__sp_P0DXG0_AT_STRYX
GWHPAORS011454 Terpenoid BAHD low borderline BAHD__00088__sp_Q9M7Z1_ODB2_ARATH