Corydalis tomentella (corydalis_tomentella)
Imported from atlas release summary for Corydalis tomentella.
1121
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1121
Candidate Genes
C4H
6.77%
C3'H/CYP98A
6.51%
BAHD
5.71%
IFS
4.14%
POD
4.01%
T3O
3.56%
UGT
3.56%
CYP76
3.5%
Other Families
62.24%
More Families (96)
7DLGT
99
3.18%
UFGT
99
3.18%
DWF4/CYP90B1
89
2.86%
4CL
87
2.79%
F3H
84
2.69%
BR6OX2/CYP85A2
71
2.28%
F3'H/CYP75B
70
2.25%
CYP71
63
2.02%
NMT
59
1.89%
H6H
52
1.67%
T16H
46
1.48%
STR
45
1.44%
CODM/T6ODM
41
1.32%
IFR
40
1.28%
CAD
39
1.25%
HCT
36
1.15%
SMT1/SMT2/SMT3
36
1.15%
BBE
33
1.06%
CYP90D1
32
1.03%
ROT3/CYP90C1
31
0.99%
CAS
31
0.99%
CSE
29
0.93%
7DLH
28
0.9%
CNMT
25
0.8%
TRI/TRII
25
0.8%
IO
24
0.77%
F3'5'H/CYP75A
24
0.77%
LAC
24
0.77%
PYKS
23
0.74%
COMT
23
0.74%
RAS
22
0.71%
NCS
21
0.67%
G8O/G8H
20
0.64%
GS
20
0.64%
TAT
20
0.64%
TPS
20
0.64%
GES
19
0.61%
16OMT
19
0.61%
FNS
18
0.58%
ANR
18
0.58%
CCR
18
0.58%
F5H/CYP84A
18
0.58%
COR
16
0.51%
SGD
16
0.51%
ANS/LDOX
15
0.48%
PMT
13
0.42%
SLS
13
0.42%
CPD/CYP90A1
13
0.42%
8HGO
12
0.38%
PAL
12
0.38%
LAMT
10
0.32%
MVK
10
0.32%
MPO
9
0.29%
DFR
9
0.29%
CPR
8
0.26%
CYP51G1
8
0.26%
AACT
8
0.26%
CYP719
7
0.22%
BR6OX1/CYP85A1
7
0.22%
GGPPS
7
0.22%
CCoAOMT
6
0.19%
FPPS
6
0.19%
CYP80B1
5
0.16%
CHI
5
0.16%
HPPR
5
0.16%
SMO1/SMO2
5
0.16%
SQS/FDFT1
5
0.16%
DXS
5
0.16%
TYDC_DDC
4
0.13%
FLS
4
0.13%
DET2
4
0.13%
FK
4
0.13%
HMGR
4
0.13%
ISY
3
0.1%
TDC
3
0.1%
CHS
3
0.1%
MCT/IspD
3
0.1%
MVD
3
0.1%
6OMT_4OMT_SOMT
2
0.06%
XMT_MXMT_DXMT
2
0.06%
ODC
2
0.06%
SQE
2
0.06%
DWF7
2
0.06%
HYD1
2
0.06%
DWF1
2
0.06%
PMK
2
0.06%
DXR
2
0.06%
IDI
2
0.06%
HMGS
2
0.06%
ADC
1
0.03%
CPI1
1
0.03%
DWF5
1
0.03%
MDS/IspF
1
0.03%
CMK/IspE
1
0.03%
HDR/IspH
1
0.03%
HDS/IspG
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 323 | 19 | BAHD (124) | View species results |
| Phenylpropanoid pathway | 247 | 12 | POD (110) | View species results |
| Alkaloid pathway | 241 | 21 | 7DLGT (47) | View species results |
| Flavonoid pathway | 141 | 10 | UFGT (92) | View species results |
| Rosmarinic acid pathway | 103 | 7 | C4H (42) | View species results |
| Steroid pathway | 66 | 11 | CAS (28) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1332 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 236 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| GWHPAORS002753 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAORS005103 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| GWHPAORS005143 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAORS005607 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAORS005813 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAORS006251 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAORS006659 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAORS006865 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| GWHPAORS006886 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAORS007156 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAORS007441 | Alkaloid | STR | low | borderline | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| GWHPAORS007442 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| GWHPAORS007443 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| GWHPAORS007785 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAORS008104 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAORS011312 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAORS011313 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAORS014408 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAORS016566 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAORS016714 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAORS017184 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| GWHPAORS017731 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAORS018496 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAORS018780 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAORS020426 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAORS023075 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAORS023078 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAORS023102 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAORS023300 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAORS023301 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAORS023520 | Alkaloid | STR | low | borderline | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| GWHPAORS025921 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAORS026087 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAORS026587 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| GWHPAORS026669 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAORS026988 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAORS026989 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAORS027594 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAORS027783 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAORS027784 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAORS029281 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAORS033146 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAORS033148 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAORS033149 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| GWHPAORS034743 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |